Gene YpsIP31758_0219 details

Gene Information

• Locus tag: YpsIP31758_0219
• Symbol: rhtC
• ID: 5384410
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: +
• Start bp: 247320
• End bp: 247940
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 640863185
• Product: threonine efflux system
• Protein accession: YP_001399216
• Protein GI: 153948452
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1280] Putative threonine efflux protein
• TIGRFAM ID: [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein

Plasmid Coverage information

• Num covering plasmid clones: 54
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTGATGC TATTTCTCAC CGTTGCGTTT ATTCATCTGG TTGCTCTGAT TAGTCCAGGG 
CCTGACTTCT TTTTTGTATC GCAAACTGCC GCCAGCCGCT CACGTGGTGA GGCGATGATG 
GGCGTGCTGG GGATCTCGCT AGGAATTGTT ATTTGGGCTG GGGTAGCACT GATGGGGTTG 
AATCTCATCT TGCAGAAAAT GGCTTGGCTG CATCAAATTA TTATGGTCGG CGGTGGGATG 
TATCTGTGTT GGATGGGGTG GCAGCTATTG AAATCGGCCC GTGCTAAACA TGATGTCGCC 
GAAGAAGAGG TACAGGTCGT CTTGCCTGCC CGTGGCCGCA CGTTTATCCG TGGTCTGCTG 
ACCAACCTGT CGAACCCAAA AGCCGTTATC TATTTCGGTA GTGTATTCTC ATGGTTTGTC 
GGTGATGACG TGGGTGCAGG TGCGCGCTGG GGGTTGTTTA TCCTGATTGT TGGCGAAACC 
TTCTTATGGT TCACCGTGGT GGCCTGCGTA TTTGCGTTAC CCACCATGCG CCGTGGTTAT 
CAGCGGCTTT CCAAGTGGAT TGATGGGCTG GCAGGTGTGT TATTTGCCGG TTTTGGTATC 
CAACTGATAT TGTCCCGCTA A 

 

Protein sequence

MLMLFLTVAF IHLVALISPG PDFFFVSQTA ASRSRGEAMM GVLGISLGIV IWAGVALMGL 
NLILQKMAWL HQIIMVGGGM YLCWMGWQLL KSARAKHDVA EEEVQVVLPA RGRTFIRGLL 
TNLSNPKAVI YFGSVFSWFV GDDVGAGARW GLFILIVGET FLWFTVVACV FALPTMRRGY 
QRLSKWIDGL AGVLFAGFGI QLILSR