Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0167 |
Symbol | |
ID | 5388440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 188789 |
End bp | 189523 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640863129 |
Product | pili assembly chaperone |
Protein accession | YP_001399164 |
Protein GI | 153948870 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACCT GTCGTGTACT GACTCTCCCT GCGCTGACGA TTGGCGTGCT GATAATGAGT GCGCTGGCAA CGAGTGCAGT GGCAAGTGTG ATTGCAGAGA GAACACGTAT TGTCTTCAGT GAAGGCAGTA CAGAAGAGTC ACTGCAACTG GTTAACAGCA ATAGCTACCC GGTAGCGGTA CAAGTTTGGG TGGATGACGG CAATTTGATG GCGACGCCTG ATAAGGCTGT TTCACCCATA TTGGTGTTAC CTCCGGTATT CCGGTTACAA CCTCAAGCAC AGCGTAGCCT GCGGTTGATC TTATCTGGTG GGAGTAAATT ACCTGCGGAT AGGGAATCTG CATTCTGGCT AAATATTTAC GAAATCCCGC CTAAGGCAAC CCCCAAATCC GGTGATGAAT CTTTTGTTAC GCTGGCCCTA CGGATGCAAT ATAAAGTCTT TTACCGCCCT AAAAACCTAC CCGCGCCAGG AGATATTTTA GGCAAGGCAT TAACCTTTAG CCTCGAGCGT AACGGCGACA GTGCGCTGAT TAAGGTTAAC AATCCAACCC CTTACTATGC ATCCTTCGCT GCTTTGACCA TCGGTTCAGC CGAAGGCCCT CCGGAAATGG TGGCCCCGTT CTCTCAATTA GATTTTCCAC TAAACCGAGC GCCAATTAGC GACAACAAAA CCGTCAATTT TGATTTAATT GATGATTTAG GCAACCGAAA CTCTTTTAGC CATGAGTTGA AATAA
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Protein sequence | MTTCRVLTLP ALTIGVLIMS ALATSAVASV IAERTRIVFS EGSTEESLQL VNSNSYPVAV QVWVDDGNLM ATPDKAVSPI LVLPPVFRLQ PQAQRSLRLI LSGGSKLPAD RESAFWLNIY EIPPKATPKS GDESFVTLAL RMQYKVFYRP KNLPAPGDIL GKALTFSLER NGDSALIKVN NPTPYYASFA ALTIGSAEGP PEMVAPFSQL DFPLNRAPIS DNKTVNFDLI DDLGNRNSFS HELK
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