Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0096 |
Symbol | tpiA |
ID | 5387377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 102729 |
End bp | 103496 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640863055 |
Product | triosephosphate isomerase |
Protein accession | YP_001399096 |
Protein GI | 153950628 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0149] Triosephosphate isomerase |
TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 57 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGACATC CATTAGTTAT GGGTAACTGG AAGCTGAACG GTAGTACTCA TATGGTTAAC GAGCTTATCG CTGGCCTGCG TAAAGAATTG AGCACCGTTG ATGGTTGTGG CGTTGCCATT GCCCCACCGG CGATCTATCT AAATCAGGCA AAACATGAGC TTGCTGGTAG CCGTATTGCT CTGGGTGCTC AAAACGTCGA TGTGAACCTC TCCGGCGCAT TTACCGGTGA AACATCTGCT GAAATGCTGA AAGATATCGG TGCGCAATAC ATTATTATCG GCCACTCTGA GCGCCGTACT TATCACCAAG AAAGTGATGA ATTGATCGCG AAGAAATTTG GCGTACTGAA AGAGATCGGC TTGATCCCAG TATTGTGTAT CGGTGAGTCC GAAGCAGAAA ACGAAGCGGG CCAAACTGAA GCAGTATGCG CCAAACAACT GGACGCCGTG CTGAATACCC TAGGCGTGAA AGCGTTCGAA GGTGCGGTTA TCGCTTATGA GCCAATCTGG GCTATCGGTA CCGGTAAATC AGCAACTCCA GCGCAGGCTC AGGCTGTTCA CAAATTTATC CGTGACCATA TCGCCAAGCA AGACGCAGCA GTTGCAGCAC AAGTGATCAT TCAGTACGGC GGTTCTGTTA ACGATAAAAA CGCAGCAGAA TTGTTCACTC AGCCAGATAT TGATGGCGCA CTGGTTGGCG GTGCATCACT GAAAGCAGAC GCTTTCGCAG TTATCGTGAA AGCAGCCGCT AAAGCTAAAA AAGCCTAA
|
Protein sequence | MRHPLVMGNW KLNGSTHMVN ELIAGLRKEL STVDGCGVAI APPAIYLNQA KHELAGSRIA LGAQNVDVNL SGAFTGETSA EMLKDIGAQY IIIGHSERRT YHQESDELIA KKFGVLKEIG LIPVLCIGES EAENEAGQTE AVCAKQLDAV LNTLGVKAFE GAVIAYEPIW AIGTGKSATP AQAQAVHKFI RDHIAKQDAA VAAQVIIQYG GSVNDKNAAE LFTQPDIDGA LVGGASLKAD AFAVIVKAAA KAKKA
|
| |