| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0093 |
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| Symbol | ligK |
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| ID | 5387259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 99680 |
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| End bp | 100393 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640863052 |
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| Product | hypothetical protein |
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| Protein accession | YP_001399093 |
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| Protein GI | 153948889 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0684] Demethylmenaquinone methyltransferase |
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| TIGRFAM ID | [TIGR02798] 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 65 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCTGG TTAATATGAA AGGGGTCGTG GTCACAAACA TTGAACGAGC TGAACTAGCC
CTGTTACAAC GTTTCGCTGA ATATGGCGTG GCAACAGTGC ATGAAGCTCA ACTGCGGCAG
GGACTATTGG ATGAGCGAAT TAAACCTATT CAGCAAGGGC GCTGTATTGC TGGCAATGCG
GTGACGGTAT TGGTTACACC CGGAGATAAC TGGATGTTCC ATGTTGCCGT AGAGCAGTGT
CAGCCTGGCG ATGTGTTGCT CGTTGCGCCG ACCTCCGAAT GCCATGATGG CTTTTTTGGT
GACCTGCTCG CGACCTCACT GCTGGCGCGC GGCGTGGTGG CATTGGTTGG AGATATCGGG
ATCCGAGATA GCCAGACGCT GCGCGAAATG AATTTCCCTG TGTGGTCGCG TGCGGTTTGG
GCACAAGGTA CGGTGAAAGC CTCGCTTGGC TCGGTCAATG TGCCGGTGAT CTGCGCGGGT
CAGTTGGTCA ACCCCGGCGA TATTGTGGTG GCAGACGATG ATGGCGTAGT CATTGTGCCA
AGAGAACAAG CCACCGCGAT TGCTGATGCG GCACAGACAC GGGTAGATCT TGAAACGAGC
AAACGTCAGC GTCTGGCTAA TGGCGAGCTC GGGCTGGATA TCTATCAAAT GCGTGCCCCT
CTGGCGAAAA AAGGGCTGCG TTACGTCAAT AGTCTCAACG CGTTAAAGTC ATAA
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| Protein sequence | MSLVNMKGVV VTNIERAELA LLQRFAEYGV ATVHEAQLRQ GLLDERIKPI QQGRCIAGNA
VTVLVTPGDN WMFHVAVEQC QPGDVLLVAP TSECHDGFFG DLLATSLLAR GVVALVGDIG
IRDSQTLREM NFPVWSRAVW AQGTVKASLG SVNVPVICAG QLVNPGDIVV ADDDGVVIVP
REQATAIADA AQTRVDLETS KRQRLANGEL GLDIYQMRAP LAKKGLRYVN SLNALKS
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