Gene YpsIP31758_0083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0083 
SymbolcpxA 
ID5388389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp88798 
End bp90174 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content50% 
IMG OID640863043 
Producttwo-component sensor protein 
Protein accessionYP_001399084 
Protein GI153948865 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAACA GTTTAACGAC GCGAATTTTT GCTATTTTCT GGTTTACTTT AGCGTTAGTG 
CTCATGCTAG TGCTGATGGT GCCAAAGCTT GATTCGCGTC AACTCACTGT TTTACTCGAC
AGTGAACAGC GTCAGGGAAC GATGCTGGAA CAACATATTG AAGCTGAACT GGCCAATGAT
CCTGCCAATG ACCTCATGTG GTGGCGTAGG CTACACCGCG CCATTGAGAA ATGGGCTCCG
CCTGGGCAAC ATTTGATTTT GGTGACGTCT GAGGGCCGTA TCATTGGCGT ACAGCGTCAA
GAAGTGCAAA TGGTGCGTAA CTTTATCGGC CAATCGGATA ACGCCGATCA GCCGAAAAAG
AAAAAGTATG GCCGGGTAGA AATGGTCGGT CCCTTTTCCA TCAGGGACGG CGAAGATAAC
TATCAGCTTT ATCTAATACG CCCCGCCAAT AGTCCGCAAT CTGATTTTAT TAATCTGATG
TTTGACCGCC CGCTGCTGCT CTTGATTGCG ACCATGTTGA TCAGTGCACC GCTGCTACTT
TGGTTGGCAT GGAGCCTGGC GAAACCCGCC CGCAAGCTGA AAAATGCGGC TGATGATGTG
GCCCGAGGTA ACCTGAAACA GCATCCGGAA CTGGAATCTG GTCCACAGGA ATTTTTAGCC
ACAGGTGCCA GTTTCAACCA GATGATCAGT TCGTTAGACA GAATGGTCGT CGCTCAACAA
CGGCTGATTT CAGATATTTC CCATGAGTTA CGCACACCAC TTACCCGGCT GCAACTGGCC
ACCGCGCTGA TGCGCCGCCG TCATGGTGAA GGGAAAGAAT TAGAGCGTAT CGAAATGGAA
GCACAGCGCT TAGATAGCAT GATTAATGAC TTGCTAGTGT TATCGCGTAG CCAGCATAAA
AATGAATTAC ACCGCGAACC CATTAAAGCT GATGAGCTTT GGTCCGATGT GCTGGAGAAT
GCACAGTTCG AGGCTGAGCA AATGGGTAAA ACGCTGGTAG TCACGGCACC TCCGGGGCCA
TGGCCCTTAT TTTGTAATCC TGCGGCCCTT GACAGTGCGC TGGAGAATAT CGTGCGTAAC
GCACTGCGTT ACTCCCATCA TCATATTGCG GTGGCATTCA GCATAGATAA TCAAGGCGTC
ACTATCATTG TTGATGATGA TGGTCCAGGC GTCAGCCCAG AGGACCGTGA ACAAATATTC
CGGCCATTTT ATCGTACTGA TGAAGCCCGA GATCGGGCGT CGGGAGGAAC AGGATTGGGC
CTGGCAATTG TTGAAACCGC GGTGAGTCAG CATCGAGGGT GGGTAAAAGC CGAAGATAGC
CCATTAGGTG GCTTACGCCT GATTGTCTGG CTACCGCTGC ATCCGCTTAA ATCTTAA
 
Protein sequence
MINSLTTRIF AIFWFTLALV LMLVLMVPKL DSRQLTVLLD SEQRQGTMLE QHIEAELAND 
PANDLMWWRR LHRAIEKWAP PGQHLILVTS EGRIIGVQRQ EVQMVRNFIG QSDNADQPKK
KKYGRVEMVG PFSIRDGEDN YQLYLIRPAN SPQSDFINLM FDRPLLLLIA TMLISAPLLL
WLAWSLAKPA RKLKNAADDV ARGNLKQHPE LESGPQEFLA TGASFNQMIS SLDRMVVAQQ
RLISDISHEL RTPLTRLQLA TALMRRRHGE GKELERIEME AQRLDSMIND LLVLSRSQHK
NELHREPIKA DELWSDVLEN AQFEAEQMGK TLVVTAPPGP WPLFCNPAAL DSALENIVRN
ALRYSHHHIA VAFSIDNQGV TIIVDDDGPG VSPEDREQIF RPFYRTDEAR DRASGGTGLG
LAIVETAVSQ HRGWVKAEDS PLGGLRLIVW LPLHPLKS