| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0069 |
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| Symbol | rfaF |
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| ID | 5385309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 74380 |
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| End bp | 75444 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640863029 |
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| Product | ADP-heptose:LPS heptosyltransferase II |
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| Protein accession | YP_001399070 |
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| Protein GI | 153947533 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 0.270694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAC TGGTCATCGG CCCTTCATGG GTTGGCGATA TGATGATGTC GCAAAGTCTT
TACCGTACCC TGAAGGCCGA ATATCCGGCA GCAGACATTG ATGTGATGGC ACCCGCATGG
TGCCGTCCGC TTCTGGCCAG AATGCCGGAA GTCCGTCACG CAATTCCAAT GCCGTTAGGC
CATGGGGCAT TTGCTTTTGA GGAGCGTCGC CGTTTGGGAT TGGCCTTACG TGAAACCGAG
TATGATCGTG CTTACGTGTT GCCCAACTCA TTTAAATCCG CGCTGATACC TTACTTTTCA
GGGATCAAAC GACGTATTGG CTGGCGTGGC GAAATGCGTT ATTTCCTGCT CAATGACCTC
CGTATTCTGG ATAAGCAAGC CTTTCCAATG ATGGTCCAGC GCTACGTTGC GCTGGCCTAT
GATAAAGAAC GCATCCGTTC AGCGGCAGAT TTACCACAAC CGTTGTTGTG GCCGCAATTG
CAAGTACGCG ATGAAGAAAT TGCAGAGACA ACGGCCTCAT TCAATCTGAC CGATAACCGG
CCCATTATTG GATTCTGCCC TGGCGCAGAA TTTGGGCCAG CGAAACGTTG GCCGCATTAC
CACTACGCCA CGCTGGCGCA GAAATTGATT GATGATGGCT ATCAGGTCGT CTTATTCGGT
TCTGCGAAAG ACAATGAAGC TGGTGAAGAT ATCCGTCAGG CTCTCAGCGA TACAGATCGT
GAATATTGCC TCAATCTGGC AGGGCAGACC TCACTGGAAC AAGCGGTCGT TCTCATCGCC
GCCTGTAGTG CCGTCGTGAG TAACGACTCT GGTTTAATGC ATGTCGCGGC GGCACTCAAC
AAGCCATTAG TGGCATTGTA TGGCCCGAGC AGCCCAGACT TCACGCCACC ACTGTCAGAG
AAAGCCACGG TGATCCGTCT GATTACCGGC TATCACAAAG TCCGCAAGGG CGATTCTGCA
CAGGGCTATC ATCAAAGTTT GATTGATATC CAACCCGAAC ACGTGATGGC CGCGCTTGAG
AAGCAATTGG CTACGCAAGA ATGCTCAGTC AAAGGGGGCG ATTAA
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| Protein sequence | MKILVIGPSW VGDMMMSQSL YRTLKAEYPA ADIDVMAPAW CRPLLARMPE VRHAIPMPLG
HGAFAFEERR RLGLALRETE YDRAYVLPNS FKSALIPYFS GIKRRIGWRG EMRYFLLNDL
RILDKQAFPM MVQRYVALAY DKERIRSAAD LPQPLLWPQL QVRDEEIAET TASFNLTDNR
PIIGFCPGAE FGPAKRWPHY HYATLAQKLI DDGYQVVLFG SAKDNEAGED IRQALSDTDR
EYCLNLAGQT SLEQAVVLIA ACSAVVSNDS GLMHVAAALN KPLVALYGPS SPDFTPPLSE
KATVIRLITG YHKVRKGDSA QGYHQSLIDI QPEHVMAALE KQLATQECSV KGGD
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