| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0061 |
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| Symbol | radC |
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| ID | 5385472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 68215 |
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| End bp | 68883 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640863021 |
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| Product | DNA repair protein RadC |
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| Protein accession | YP_001399062 |
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| Protein GI | 153948496 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2003] DNA repair proteins |
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| TIGRFAM ID | [TIGR00608] DNA repair protein radc |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0000000803057 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATGAGT GGTATGGGCA GGTGGCCCCA AGAGAGAAAT TACTGAAGTA TGGTGCTGCG
GTACTGACTG ATGCTGAACT ACTCGCTATT TTTTTGCGTA CGGGTATTCC TGGGATGCAT
GTAATGAAGA TGGCTGAGTA TTTAATTGAG ACATTTGGCT CACTGCATGG GTTGATATCT
GCAGATTATC AAACGTTATG TGCCCATAAA GGGATTGGTG CATCCAAATA TAGTCAGATT
CAGGCTATCG GTGAGCTGGC CTGTCGTTGT TTTTCATCTC ATCTGATGCG GGAAAGTGTT
CTGCTTAACC CCGGTATCAC ACAAAAATTT CTGCAAAATA TACTGTCTCA CCGTGAACGA
GAGATTTTTT TAGTCGTATT TTTGGATAAC CAGCATCGTG TTATTCGCCA TGAAGAGATG
TTTACTGGTA CCATCAGCAG CGTAGAGGTC CATCCGAGAG AAATTGTGCG TGAAGCGCTG
AAGGTTAATG CCGCCGCGCT GATTTTGGCG CATAATCATC CCTCTGGTAA GGCTGAACCG
AGCCAAGCTG ACCGTTTGAT AACGACGCAG GTGATAAAAG CCTGTTCATT ATTAGATATT
CGGGTGCTCG ATCATTTAGT AGTTGGCCGG GGTGAATGTG TCTCATTTGC TGAACGAGGA
TGGCTTTAG
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| Protein sequence | MDEWYGQVAP REKLLKYGAA VLTDAELLAI FLRTGIPGMH VMKMAEYLIE TFGSLHGLIS
ADYQTLCAHK GIGASKYSQI QAIGELACRC FSSHLMRESV LLNPGITQKF LQNILSHRER
EIFLVVFLDN QHRVIRHEEM FTGTISSVEV HPREIVREAL KVNAAALILA HNHPSGKAEP
SQADRLITTQ VIKACSLLDI RVLDHLVVGR GECVSFAERG WL
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