Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0058 |
Symbol | slmA |
ID | 5387780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 65650 |
End bp | 66246 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640863018 |
Product | nucleoid occlusion protein |
Protein accession | YP_001399059 |
Protein GI | 153947788 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.00579463 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGAAA AAGAAAATAC GAAAAGGAAC AGGCGCGAGG AAATATTGCA GGCTTTAGCG CAGATGCTGG AATCCAGCGA CGGCAGCCAA CGCATTACTA CCGCGAAACT CGCCGCTAAT GTGGGGGTTT CTGAAGCAGC GCTTTATCGG CATTTCCCCA GTAAAACGCG GATGTTTGAT AGCCTGATCG AGTTTATTGA AGATAGTCTG ATGTCCCGCA TTAATTTGAT TCTACAAGAT GAAAAAGAGA CGTTTAATCG CCTCCGCTTA ATCCTGCTGT TGGTATTAGG GTTTGCAGAG CGCAACCCTG GGCTGACCCG AATCATGACC GGGCATGCGC TCATGTTTGA GCAGGATCGC TTACAAGGGC GGATTAACCA GCTATTTGAA CGAATTGAAA TGCAGTTACG CCAAGTCCTT CGTGAGAAAA AGCTGCGTGA TGGACAAGGC TTTATCCATG ATGAAGCGTT ACTGGCCACC CAGTTGTTGG CATTTTGCGA AGGGATGCTT TCACGCTTCG TTCGTTCTGA ATTCCGTTAC TGCCCAACAC AAGAGTTTGA TTCCCGCTGG CCATTGATTG TCGCCCAGTT GCAATAA
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Protein sequence | MAEKENTKRN RREEILQALA QMLESSDGSQ RITTAKLAAN VGVSEAALYR HFPSKTRMFD SLIEFIEDSL MSRINLILQD EKETFNRLRL ILLLVLGFAE RNPGLTRIMT GHALMFEQDR LQGRINQLFE RIEMQLRQVL REKKLRDGQG FIHDEALLAT QLLAFCEGML SRFVRSEFRY CPTQEFDSRW PLIVAQLQ
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