Gene YpsIP31758_0049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0049 
Symbol 
ID5388196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp57623 
End bp58774 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content54% 
IMG OID640863009 
Producthypothetical protein 
Protein accessionYP_001399050 
Protein GI153948323 
COG category[L] Replication, recombination and repair 
COG ID[COG5519] Superfamily II helicase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACTCA CAACTCCAGT GGACAGCCAG AAACAAGCCT TTCCCCTGGC TGGCAGTATC 
CAAACTCAGC CTGAATCCAG CCAGAGTGAT ATTTCCAGCA GTGATTTTGC AGAACGCATT
CCTGTATCGA TAAGCAATAT TGGTAACAAA GATATTCAGT CGGTCAGTGG TCGAAAGCTG
CATGTATTTT TGAAGGTTGG CCGTGATTTC ACAACATGGA TAAAAGCCCG TATTAAGCAA
TACGGATTTA AAGAGGGCGT GGATTACGTA ATTGTTGAAG ATTTGAGCAC CCCCGTTTCG
GGGAGCGCAA AATCTCGCCA ACAGGTCGAG CATGATTACG TTCTCAGCTT GGATATGGGT
AAAGAATTGT CGATGGTTGA ACGCAACGAG CAAGGCAAGG CTGCCCGTCG TTATTTCATC
GACTGTGAAG AGCGCCTTCG CCGTGTAGCT CCAGAGGAAT ACAGCGCCGC ACTGATGGAT
TGGCGCAAGA ACCGTGTTGC GGCCTGTGAA GACCACAAAA GCATGTCTGA GGCCGTGGCT
GATATTGGTG AGCGTGAGGG CTGGCGCACG CTAAAGGCGG GTGGGGTGAA CGTGACCACT
AAAAGCACAC TCAGGGCGAT ACTGGCCGAC TGGCTACAAC GTAGCGGCTC TCTTGAGATA
TGGCGTGTGG CTCAGGCTAC CGGCTGGCAG TGTGGCGCGT ACATCATGCC AGACGGTGAA
ATCATCGGGA CACCTGAAAA ACCGGTTCTG TTCAATGGTC GCAGTGCCGC CGCTGCCGGG
TATGTAGTGA AGGGTACACC GGAAAGTTGG CGTGATTCGG TGGCAAGGTT GGCGCGGGGT
AATCCGTCCA TGATGGCGGG GATTGGTGCC GCACTTGCCG CGCCGCTAAT TGGCCTTGCC
GGTGCTGATG GGTTCGGTAT TCACTTCTAC GAACAATCCA GCTCAGGGAA AACCACTACG
GCCAATATTG CCAGCAGCCT ATACGGTGAA CCGGATGCCC TGCGTTTGAC CTGGTTCGGG
ACGGCGCTGG GTATTGCCAA TGAAGCCGCC GCACACAATG ACGGCCTGAT GCCACTGGAT
GAGGTAGGGC AAGGCGCTGA CCCTGATAGT GTGGCTAACC CCACCGGCAA GCGGACGAGG
TTATCAGCGT AA
 
Protein sequence
MILTTPVDSQ KQAFPLAGSI QTQPESSQSD ISSSDFAERI PVSISNIGNK DIQSVSGRKL 
HVFLKVGRDF TTWIKARIKQ YGFKEGVDYV IVEDLSTPVS GSAKSRQQVE HDYVLSLDMG
KELSMVERNE QGKAARRYFI DCEERLRRVA PEEYSAALMD WRKNRVAACE DHKSMSEAVA
DIGEREGWRT LKAGGVNVTT KSTLRAILAD WLQRSGSLEI WRVAQATGWQ CGAYIMPDGE
IIGTPEKPVL FNGRSAAAAG YVVKGTPESW RDSVARLARG NPSMMAGIGA ALAAPLIGLA
GADGFGIHFY EQSSSGKTTT ANIASSLYGE PDALRLTWFG TALGIANEAA AHNDGLMPLD
EVGQGADPDS VANPTGKRTR LSA