| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_B0046 |
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| Symbol | yscS |
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| ID | 5798321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010157 |
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| Strand | + |
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| Start bp | 30545 |
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| End bp | 30811 |
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| Gene Length | 267 bp |
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| Protein Length | 88 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641337857 |
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| Product | type III secretion apparatus protein YscS |
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| Protein accession | YP_001604477 |
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| Protein GI | 162417747 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4794] Type III secretory pathway, component EscS |
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| TIGRFAM ID | [TIGR01403] type III secretion protein, HrpO family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.000000568257 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 90 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTCAAG GTGACATAAT TCACTTCACC AGTCAGGCAT TATGGCTGGT GCTAGTCCTT
TCAATGCCGC CGGTGTTAGT GGCTGCGGTG GTAGGAACTT TGGTATCTTT AGTACAAGCT
TTAACGCAAA TCCAAGAGCA AACTCTGGGC TTCGTTATCA AATTGATCGC TGTGGTGGTC
ACACTGTTTG CTACCGCCTC GTGGCTTGGT AATGAATTGC ACAGTTTTGC AGAAATGACC
ATGATGAAGA TACAAGGCAT AAGATGA
|
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| Protein sequence | MSQGDIIHFT SQALWLVLVL SMPPVLVAAV VGTLVSLVQA LTQIQEQTLG FVIKLIAVVV
TLFATASWLG NELHSFAEMT MMKIQGIR
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