Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A4164 |
Symbol | |
ID | 5802644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 4455082 |
End bp | 4455810 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641341934 |
Product | pili assembly chaperone protein |
Protein accession | YP_001608437 |
Protein GI | 162420235 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.00562333 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGTGGGCAA AGACAGCGCT ATTCGGGATA GCCTTGTGGC TCACTGCGCT AACCAGCCAG GCGGCAATTA ACCTGGATCG GACACGTATT ATCTTTAATA GTACTGATAA ATCAGCCAGT GTTATTTTGC AAAACCAGAG CCCGTCATCA CCTTATTTGG CGCAATCTTG GTTGGAAAAT ACCAAAGGCC AAAAAATAGA GAGTCCATTG GTGGCTTTAC CCCCTATGCA GCGGATTGAT GCCGGGCAAA AAAGCCAGGT TCGGATCATG AAACTACCGG ATGCCGATAA ATTACCCACT GATCGCGAGA CATTATTCTA TTTCAATGTG CGGGAAATCC CACCGCAAAG CGAAATGAAT AATGTCGTAC AAATTGCGAT TCAAAATCGG ATAAAGCTGT TTTATCGGCC CATGGCTATC AAAGCGAATT ATAGCGATAT CTGGCAAGAG AAATTACAGA TCAGTAAACT AGTGGGGGGG CTTAAAATTA ATAACCCTAC ACCTTATTAC ATTACGTTGG CTTATTTGAG TCAGAATGAA CAAGGTAACT TTCCTGGTTT TGACAGCGTC ATGATTGCGC CTTTTGGTAC TGAGTTTGTT AAAACGCCGG GTTATAGCGG TAGCCGTTAT AACGTTGGTT ATATGGATGA TTTTGGGGGC ATTGTGATAC GCACTTTTAA CTGTTTATCA GCAGAATGCC AAATTCAGCC AGCTGAAAAG AGAAGGTGA
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Protein sequence | MWAKTALFGI ALWLTALTSQ AAINLDRTRI IFNSTDKSAS VILQNQSPSS PYLAQSWLEN TKGQKIESPL VALPPMQRID AGQKSQVRIM KLPDADKLPT DRETLFYFNV REIPPQSEMN NVVQIAIQNR IKLFYRPMAI KANYSDIWQE KLQISKLVGG LKINNPTPYY ITLAYLSQNE QGNFPGFDSV MIAPFGTEFV KTPGYSGSRY NVGYMDDFGG IVIRTFNCLS AECQIQPAEK RR
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