Gene YpAngola_A4131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A4131 
SymboluhpB 
ID5802611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp4418493 
End bp4420022 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content49% 
IMG OID641341907 
Productsensory histidine kinase UhpB 
Protein accessionYP_001608411 
Protein GI162421664 
COG category[T] Signal transduction mechanisms 
COG ID[COG3851] Signal transduction histidine kinase, glucose-6-phosphate specific 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.812455 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.258097 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACAGC GCTTGGTGAT GCTGCTGGCG TTATTCTTTA TTTATTTTAC TGCGGCTTTC 
TGCCTGTGGG CTATAGGGAC ACAATTAGCT GATCGGGCTT TACAGTCGCT GCTGTTGTTC
CCATTTGGTC TGCGTATGGG GATTTTATTA CAAAGTCCAC GTGCTTACTG GCCTGGCATT
TTACTGGGTG ATGTCCTGTT GTGGTGGCTA TTAGCCGATC AATTCGATGA TTTATATCAG
TTGTGGGTCG CCTTGCCGCT GTTGTTATTG ACCACCTTAT TGGCCCTTTT TGCCTCCCCG
TGGTTATTGC GCCATCAGCA AAATGAGAGC GAATGGCAAT GGCCGTTAAT GCAGGGGGGC
GTTATCACGG TTGCCGCGCT AATACAGGCG TTGGGGTGGC AGATAGCCAG TGGGCAGGGC
GCAATGGCGC TCTTATTAGG GTTGGTTGGT GGCTTTACCA TCGCGCCTAC CTGCCTGCTG
CTGTGGCACT ATCTGGCACG TCAAATCTGG TTACCGCTTG AACCTGGGTT GATACATAAA
CCGGTTAACC TGCGGTTGCG GCATATCCTG TGGTATCTAC TGCTATTTGC CATCAGTATC
TGGTTACAGT ACCAAGTGAC TGAAACAGAT TTACGCTTAT TTGTACCGTT CTGTTTGGCG
ATCCCCATCG TGTTTATGGC ATATCGCTAT GGCTGGCAGG GGGCGTTGGC GGCCACGTTA
CTCAATGGTG TAGTGCTCTT GATTAATACA CCTGAACCCC TTGAATCTCA TCGTGGCTTG
CTACTTTCAC TGTTGGCACA AAGTCTAACA GGTCTGCTCT TGGGATCCGG CATTCAACGA
CAGCGGGAGT TGAACGATCA ACTACAAATA AAATTGAACG AAAACCGTGA GTTGGCTAAA
GCATTAGTGG TTTCTGAGGA GCATACACGG CACGATGTCG CGCGTGAGTT ACATGATGAA
GTGGGGCAAA CCGTAACGGT TATCCGTACC CAAGCCAGTA TTATTAAACG TCTGACCACC
CAGCAACCGG TACTGACCAG TGCAGAGATG ATAGAAACTG CGGCATTGCG GGTTTATGAT
GGTGTCCATG ACGTATTGGC TAAATTATGG CCAGCGGCAT TAAATAATTT GCCGCTGTCG
GCCGCCATCG CTGCATTGAT GCGCGAACTC ATTCCGCAAG ACCAGTCGGT GCTCGGTGTG
CTTAACTGGC AGGTCAATGA CCATCCGATG GATGAGACGT TGAAAATTAC GCTTTACCGT
ATATGTCAGG AGGGGGTGAC CAATGCTTAT CGGCATGGTG CCGCCAGCCG AATTGAAATT
AATGCACGGC AGGATAACCA ACAGATATAT CTAACGATTA GCGATAATGG TAAAGGTATC
GATTTAGCCT CAATTACTCC AGGCTATGGG CTACGGGGTA TTCAGTCACG GGTCAGTGCG
TTTGGGGGCA ATGTGAGCCT AAGCGTTGAT AACGGTACTT GCTTAAATGT GACCCTGCCC
ACAGTTTCTT TGTCTACAAA AGGAAACTAA
 
Protein sequence
MIQRLVMLLA LFFIYFTAAF CLWAIGTQLA DRALQSLLLF PFGLRMGILL QSPRAYWPGI 
LLGDVLLWWL LADQFDDLYQ LWVALPLLLL TTLLALFASP WLLRHQQNES EWQWPLMQGG
VITVAALIQA LGWQIASGQG AMALLLGLVG GFTIAPTCLL LWHYLARQIW LPLEPGLIHK
PVNLRLRHIL WYLLLFAISI WLQYQVTETD LRLFVPFCLA IPIVFMAYRY GWQGALAATL
LNGVVLLINT PEPLESHRGL LLSLLAQSLT GLLLGSGIQR QRELNDQLQI KLNENRELAK
ALVVSEEHTR HDVARELHDE VGQTVTVIRT QASIIKRLTT QQPVLTSAEM IETAALRVYD
GVHDVLAKLW PAALNNLPLS AAIAALMREL IPQDQSVLGV LNWQVNDHPM DETLKITLYR
ICQEGVTNAY RHGAASRIEI NARQDNQQIY LTISDNGKGI DLASITPGYG LRGIQSRVSA
FGGNVSLSVD NGTCLNVTLP TVSLSTKGN