Gene YpAngola_A4055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A4055 
Symbol 
ID5802534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp4315246 
End bp4315788 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content49% 
IMG OID641341838 
Producthemolysin activator protein 
Protein accessionYP_001608344 
Protein GI162418924 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2831] Hemolysin activation/secretion protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGGATCA CTATTGCACC GTTCGTTACA TCATGGTTTG GTGCCCAACC TATTCCCGGT 
AAAATGAGCA CTGCACCGGC GAGGTTGGTC GATATCACCA GCTCACTGGA TATCCCTTTT
AAGATCGGAA CACAGTCCTT CCAGTATCGG CCCGCTTTCA GCCAGCAACA TACCTACTCG
GATATTAGTT CACTGGATAA ATTTACGATT GGTGGCAGGA GTTCAGTGCG AGGTTTTAAT
GAGAATAACG CTCTGACGGG GTCGCGGGGG TGGTCTCTAA AAAATGATAT TTCATGGATC
AGCCCGATAC CCGGCCAGAC ATTCGTGGGC CAGCAATTCT ATATCGGCAT GGATTATGGT
GAGGTGAGTG AGCAGGGCCA ACCATTTCTT TTGGGCGAGC GTTTAGCGGG GGCCGTGGTA
GGGACTCGTG GAAATTATCA TGCGTTTGGT TACGATTTTA ATGTCGGCGT GCCGATAACC
AAACCCGCAG AATTTGATGC CGATCCGTTG GTTTTTGGGT TTACGCTAAC TTGGCAATAT
TAG
 
Protein sequence
MWITIAPFVT SWFGAQPIPG KMSTAPARLV DITSSLDIPF KIGTQSFQYR PAFSQQHTYS 
DISSLDKFTI GGRSSVRGFN ENNALTGSRG WSLKNDISWI SPIPGQTFVG QQFYIGMDYG
EVSEQGQPFL LGERLAGAVV GTRGNYHAFG YDFNVGVPIT KPAEFDADPL VFGFTLTWQY