Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A4008 |
Symbol | oprM |
ID | 5802487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 4264380 |
End bp | 4265786 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641341794 |
Product | outer membrane protein oprM |
Protein accession | YP_001608301 |
Protein GI | 162421409 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 75 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAGTC GTATACTGAT ATTATCGTTA CCCGCGCTGC TGGCCGGATG TATTTCTCTC GATCCGGACT ATCAGCGCCC AGTGGCACCG GTTCCGGCAA CCTTGCCTTA CTCAACCGCC AGTAGCAGCA AGGCGGCAGA TATTCCGTGG CAGGAGACGA TCATTGATCC TAAACTGCGC CAGGTGATTG CGTTGGCATT AGAGAGCAAC CGTGACCTAC GCCAAGCTAT TGCCGATATC GAAGCGGCCC GTGCGCAATA TGGTGTGCAA CGGGCCGCCC AGATACCAAC GGTTAATGCA GGAGTCAATG GCAGCCGTGG GCGCGGATTG TCCGATACCT CTGATGGCAA CAACAATACC GCTATCAGCC AGAGTTATGG TGCCCAAGCC AGTGTTAGTG CCTTTGAACT GGATTTATTT GGTAAAAAAA GCAGCTTGTC TCATGCTGAA TTTGAAACCT ATCTGGCAAC AGAAGAAGCG GCGAAAACCA CCCGCATCAC ACTGATTGCT GATACTGCGA CAGCTTGGGT AACACTGGCG GCTGACCAGA ATCAATTATT GCTGGCCGAA GAGACGTTAA AAAGTGCGGA GCAATCTTTA AAATTGGCAC AACTGCGGCA GAAAAATGGG ATAGCGTCAC GTATTGATGT AGCGGCGATG GAAACGTTGT ATCAATCAGC GCGGGCCGAT GTTGCACAAT ACAAAACCAC GGTAGCGCAG GATAAAAATG CACTGGATTT GTTGGTGGGC CAACCCGTGG CAGCACATTT ACTGCCAGTG ACGGCCTCTA CATTGCCGGA GGTCATCAAA GCTGTACCCG TTGGGCTTTC CTCTGATGTG TTGTTGAACC GGCCTGATGT ATTGGAAGCC GAGCATAAAC TGAAATCGGC CAATGCCAAT ATTGGGGCCG CTCGGGCGGC ATTCTTCCCC AGTGTGACCT TAACCGCCAG TGGGGGCGTC AGCAGTTCGG CACTTTCAAC ATTGCTTAGT GAGGGGGCAG GGATTTGGTC ATTAGCCCCG GCGATTACCT TGCCGATATT TGATGGCGGG GCAAATCGGG CTGCACTGGA ATATTCACAG GCACAGAAAA CCGGCTACAT TGCCGCATAT GAGAAAGCGA TTCAGACGGC GTTTAAGGAA GTCGCCGATG CACTGGCGCG TAAAGCGACC ATTCAAGAAC AACGGGCAGC ACAGCAAGCT TACGTGGCGG CGGCACAAGA AAGTGTTGAA CTGGCACAAA AACGCTATAA ACAGGGAATC GATACATACT TGAATATGTT AGATGCTCAA CGCACCTTAT ATGCCGCGCA AACTCGTCTG ATTGCCGTGC AACAGATACA AACTAACAAT TTGATTACGT TGTATAAAGT TTTAGGTGGT GGGGTATCTG ACGTCGCCAA AGAGTAG
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Protein sequence | MFSRILILSL PALLAGCISL DPDYQRPVAP VPATLPYSTA SSSKAADIPW QETIIDPKLR QVIALALESN RDLRQAIADI EAARAQYGVQ RAAQIPTVNA GVNGSRGRGL SDTSDGNNNT AISQSYGAQA SVSAFELDLF GKKSSLSHAE FETYLATEEA AKTTRITLIA DTATAWVTLA ADQNQLLLAE ETLKSAEQSL KLAQLRQKNG IASRIDVAAM ETLYQSARAD VAQYKTTVAQ DKNALDLLVG QPVAAHLLPV TASTLPEVIK AVPVGLSSDV LLNRPDVLEA EHKLKSANAN IGAARAAFFP SVTLTASGGV SSSALSTLLS EGAGIWSLAP AITLPIFDGG ANRAALEYSQ AQKTGYIAAY EKAIQTAFKE VADALARKAT IQEQRAAQQA YVAAAQESVE LAQKRYKQGI DTYLNMLDAQ RTLYAAQTRL IAVQQIQTNN LITLYKVLGG GVSDVAKE
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