Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3992 |
Symbol | nusA |
ID | 5802470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 4244310 |
End bp | 4245797 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641341777 |
Product | transcription elongation factor NusA |
Protein accession | YP_001608285 |
Protein GI | 162418514 |
COG category | [K] Transcription |
COG ID | [COG0195] Transcription elongation factor |
TIGRFAM ID | [TIGR01953] transcription termination factor NusA [TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000690041 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAAG AGATTCTGGC TGTTGTAGAA GCAGTTTCCA ATGAGAAATC CCTTCCGCGC GAGAAGATTT TTGAGGCGTT GGAAACCGCT CTAGCGACAG CAACCAAGAA AAAATACGAA CAAGAGATTG AAGTCCGCGT CAGTATTGAC CGTAAAACCG GTGATTTTGA TACTTTCCGC CGTTGGGTCG CTGTTGACGA AGTGACTATG CCAACCCGTG AAATCACGTT GGATGCGGCT CAATTTGAAG ATCCTTCTCT CCAATTGGGT GATTATGTCG AAGACCAGAT TGAATCGGTG ACTTTTGACC GCATTACCAC CCAAACAGCC AAGCAAGTCA TCGTACAAAA AGTACGTGAA GCTGAACGGG CGATGGTTGT TGAGCAGTTC CGTCAATATC TGGGGCAAAT TGTCACTGGT ATTGTTAAGA AAGTTAGCCG TGACAGTATT GCACTGGATC TGGGCCACAA TGCGGAAGCT GTTATTGGTC GTGAAGATAT GCTCCCGCGT GAAAATTTCC GCCCAGGTGA CCGTATCCGT GGTGTTCTGT ATGACGTGCG TCCAGAAGCT CGTGGCGCAC AGTTGTTTGT CAGCCGTTCA CGTTCTGAAA TGTTGGTCGA ACTGTTCCGC ATTGAAGTAC CAGAAATTGG TGAAGAGCTG ATCGAAATTA AAGCCGCTGC CCGTGATCCT GGCTCTCGTG CTAAAATTGC GGTCAAAACC AATGACAAGC GTATCGATCC GGTTGGTGCT TGCGTTGGTA TGCGTGGTGC CCGTGTTCAG GCTGTGTCCA GCGAGCTTGG CGGCGAGCGC ATTGATATTG TATTGTGGGA TGATAATCCA GCCCAGTTTG TTATTAACGC TATGGCGCCA GCTGATGTTG CGTCTATTGT GGTTGATGAA GACAAACACA CGATGGATGT TGCCGTTGAA GCCAGTAATT TGGCCCAGGC AATTGGTCGT AATGGCCAGA ACGTACGTTT AGCCGCGCAG CTTAGTGGCT GGGAACTGAA CGTAATGACG GCGGACGATC TTCAGGCGAA GCATCAGGCC GAGGCTCATG CCGCTATTGA TACCTTCACT AAATATCTTG ATATCGATGA AGACTTTGCC ACCGTATTGG TAGAAGAAGG TTTCTCTTCT CTGGAAGAGT TGGCTTATGT GCCAATGAAA GAACTTCTGG AAATCGATGG TCTTGACGAA GATACGGTTG AAGCGCTGCG TGATCGCGCC AAAGCTGCAT TGACCACGCT GGCCCTGGCA CAAGAAGAAA GTTTTGGCGA CCAGAAACCC GCTGATGACC TGTTGAATTT AGCGGGTCTG GAACGTAGCA TGGCATTCAA ATTGGCTGCG CGCGGTGTAT GTACGCTGGA AGATCTTGCC GAGCAGGGTA TCGACGATTT GGCAGATATT GAAGGGCTTA GCGATGAGCA AGCCGGTGAG CTGATTATGG CCGCACGTAA TATCTGTTGG TTTGGCGATA ATGCGTAA
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Protein sequence | MNKEILAVVE AVSNEKSLPR EKIFEALETA LATATKKKYE QEIEVRVSID RKTGDFDTFR RWVAVDEVTM PTREITLDAA QFEDPSLQLG DYVEDQIESV TFDRITTQTA KQVIVQKVRE AERAMVVEQF RQYLGQIVTG IVKKVSRDSI ALDLGHNAEA VIGREDMLPR ENFRPGDRIR GVLYDVRPEA RGAQLFVSRS RSEMLVELFR IEVPEIGEEL IEIKAAARDP GSRAKIAVKT NDKRIDPVGA CVGMRGARVQ AVSSELGGER IDIVLWDDNP AQFVINAMAP ADVASIVVDE DKHTMDVAVE ASNLAQAIGR NGQNVRLAAQ LSGWELNVMT ADDLQAKHQA EAHAAIDTFT KYLDIDEDFA TVLVEEGFSS LEELAYVPMK ELLEIDGLDE DTVEALRDRA KAALTTLALA QEESFGDQKP ADDLLNLAGL ERSMAFKLAA RGVCTLEDLA EQGIDDLADI EGLSDEQAGE LIMAARNICW FGDNA
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