Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3973 |
Symbol | ispB |
ID | 5802451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 4228491 |
End bp | 4229462 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641341759 |
Product | octaprenyl diphosphate synthase |
Protein accession | YP_001608269 |
Protein GI | 162421069 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000694297 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCTAG AAAAGATTAT CGAGTTAACC GCGCCAGATA TGGCGGCAGT AAATACAACA ATTCTCGACC AATTGAACTC TGATGTTGTT CTTATCAATC AATTGGGTCA TTACATTATC AGCGGTGGTG GAAAACGTAT TCGCCCAATG ATCTCGGTCT TGGTGGCCCG GGCCCTTAAC TATCAGGGTA GCAAGCATAT CACCGTCGCG GCACTCATCG AGTTTATCCA TACGGCGACA CTGCTACACG ATGATGTTGT CGATGAATCC GATATGCGGC GTGGCAAAGC GACCGCCAAT GCCGCATTTG GCAACGCTGC CAGTGTATTG GTCGGCGATT ACATTTATAC GCGCTCATTC CAGATGATGA CAGGGCTGCA ATCAATGCGA GTGCTGACAT TGATGTCTGA AGCGACAAAC GTTATCGCCG AAGGTGAGGT ATTACAGTTA ATGAACTGTA ATAACCCAGA CATCACTGAA GAAAGCTATA TGCAGGTCAT TTACAGCAAA ACAGCACGCT TATTCGAGGC CGCTGCACAA TCTGCCGCAA TATTGTCAGA TGCCAGTGAG GAGCAGGAAC TGGCATTACA GAACTATGGT CGTTATCTGG GGACTGCCTT CCAGCTTATT GATGATCTAC TGGATTACAG CGCAGAGGGT TCCACGTTAG GCAAAAATAC GGGGGATGAC CTGAATGAAG GTAAACCGAC GTTGCCACTG CTACATGCCA TGCATAATGG CACCCCAGAA CAAGCCGCAA TGATCCGGCA AGCGATTGAA CAGGGGAATG GCCGTCATTT ACTCGAACCA GTGCTGGCTG CCATGGAGCA TTGTGGCTCT CTGGTCTATA CCCGTCAGCG TGCTGAAGAA GAAGCAGATA AAGCGATTGC CGCATTGCAC GCGTTACCTG AAAGTGATTA TCGTCTGGCC CTTGAAGGCT TGGCACATAT CTCAGTGCAC CGCCGTTTTT GA
|
Protein sequence | MNLEKIIELT APDMAAVNTT ILDQLNSDVV LINQLGHYII SGGGKRIRPM ISVLVARALN YQGSKHITVA ALIEFIHTAT LLHDDVVDES DMRRGKATAN AAFGNAASVL VGDYIYTRSF QMMTGLQSMR VLTLMSEATN VIAEGEVLQL MNCNNPDITE ESYMQVIYSK TARLFEAAAQ SAAILSDASE EQELALQNYG RYLGTAFQLI DDLLDYSAEG STLGKNTGDD LNEGKPTLPL LHAMHNGTPE QAAMIRQAIE QGNGRHLLEP VLAAMEHCGS LVYTRQRAEE EADKAIAALH ALPESDYRLA LEGLAHISVH RRF
|
| |