Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3891 |
Symbol | hasE |
ID | 5802369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 4128322 |
End bp | 4129650 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641341682 |
Product | HlyD family hemolysin secretion protein |
Protein accession | YP_001608192 |
Protein GI | 162418329 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.76201 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCCTG AATCAGTCTG TTATTCGGTT GCGAATGCCA ATCGCCAACC ACCACTCCAA ATAAACAGTG GGCGCTATCT CAATATAGGT GGGGGGCTGG TCGTTATCGG CTTCATCGGC TTTTTACTTT GGGCGGGGTT AGCGCCGTTA GATAAAGGCG TTGCCGTGAC CGGGCTGCTT GTGGTGGCAG AAAACCGCAA AGTGATCCAG CCGCTGCAAG GGGGGCGTAT TCAGCAACTG CATGTCACTG AAGGCGACGA AATAGTGTCT GGGCAATTAT TGGTCACGCT GGATGACACG GCGATACGCA ATCAGCGGGA TAATTTACAG CATCAGTATC TAAGCGCCCT TGCTCAGGAA GCACGTTTAA CTGCTGAGCA AAACGATCTG GATGTGATCA CTTTCCCGCA GGCGCTGCTT GAGCACGCAA CACAACCAGC GGTTGAACGT AATATTATTT TGCAGCAACA GCTTTTACAT CACCGCCGCC AGGCGCACTT GAGTGAAATC GCCCGGTTAT CGACACAGCT CACTCGCCAT CAGGCTCGGC TCGATGGGTT GCAAGCTATG CGGAGCAATC ATCAACGTCA ATCCAATTTA TTCCAGCAAC AATTAGACAG TGTGCAGTTA TTGGCAAAGG ATGGTCATAT TGCCAAAAAT AAATTGTTAG AAATGGAAAG CCAGTCAACC TCACTCCAGG CACGAGTAGA ACAAAGTACC AGCGATATTG CGGAAGCACA TAAGCTTATC GATGAAACAG AACAACATGT TTTACAACGG CGCGAACAAT ATCAAAGTGA GAATAGCGAG CAATTAGCCA AGGCACAGCA AAACACCCAA GAACTGGTCC AACGTTTAAA TATTGCAGAA TATGAATTGA GTCATACCCG TATTTTTGCA CCAGTCAGTG GTTCAGTTAT CGCATTGGCT CAACACACTG TGGGGGGCGT AGTAAGCTCA GGGCAGGCAT TAATGGAAAT TGTCCCCAGT GGGCAGCCGT TATTCGTTGA GGCTCAGTTG CCGGTGGAGC TAATTGATAA GGTTGCGGTC GGGCTACCTG TAGATCTCAA TTTTTCTGCG TTTAATCAAA GTAATACCCC CCGGCTACAA GGCTCTGTAT GGCGCATCGG AGCCGATCGT ATACAACCCC CACCTACTTC ACCGCCTTAT TACCCTTTAA CCGTTGCGAT TGATCTTGAC CCGACGGAAC TGGCAATCCG TCCAGGTATG GCCGTTGATG TTTTTATACG TACCGGAGAA AGGTCATTAC TCAGCTATTT ATTTAAGCCA TTCACTGATC GCCTGCACCT CGCGTTAGCC GAGGAATAA
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Protein sequence | MLPESVCYSV ANANRQPPLQ INSGRYLNIG GGLVVIGFIG FLLWAGLAPL DKGVAVTGLL VVAENRKVIQ PLQGGRIQQL HVTEGDEIVS GQLLVTLDDT AIRNQRDNLQ HQYLSALAQE ARLTAEQNDL DVITFPQALL EHATQPAVER NIILQQQLLH HRRQAHLSEI ARLSTQLTRH QARLDGLQAM RSNHQRQSNL FQQQLDSVQL LAKDGHIAKN KLLEMESQST SLQARVEQST SDIAEAHKLI DETEQHVLQR REQYQSENSE QLAKAQQNTQ ELVQRLNIAE YELSHTRIFA PVSGSVIALA QHTVGGVVSS GQALMEIVPS GQPLFVEAQL PVELIDKVAV GLPVDLNFSA FNQSNTPRLQ GSVWRIGADR IQPPPTSPPY YPLTVAIDLD PTELAIRPGM AVDVFIRTGE RSLLSYLFKP FTDRLHLALA EE
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