| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A3728 |
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| Symbol | hofQ |
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| ID | 5802205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | - |
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| Start bp | 3950151 |
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| End bp | 3951653 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641341532 |
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| Product | putative outer membrane porin HofQ |
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| Protein accession | YP_001608044 |
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| Protein GI | 162419434 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4796] Type II secretory pathway, component HofQ |
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| TIGRFAM ID | [TIGR02515] type IV pilus secretin (or competence protein) PilQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000295342 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTATTT TTATACCCGC TGCAGGTAAG CAGTTTAGCA CTTGGTGGTG CAATCTGACG
AACTTCAATT TGGTATATTT TCCTGGCAAA AATAAACACT TAAATCGCTC TAGAGGGTTG
ATTAGCTTAT TAATTGGGTG TCTCTTACTC ATGGGCGTGC CATCACACAG CCGCTCCTCC
AATAGCCATT TATCAGACAG CAAGTTATCA AACAGTGCTT CATCAAATAG CACTTCATCA
AACAGTGTCT TATCAAATAA TGTCTCATCA AGTAATATCT CACCAAATAA TGCCTCATCC
AGTAATGCCT CATTACCGCG TACCCGCAGC GGGGGGCCAG TCACCCTGGA ATTTCAGGAT
GCGCCGGTCT CCGTCATCTT GCAGGCTCTG GCTGACTATC GGCAACTTAA TCTGATCACG
ACTACCGGTG TGGGCGGCAA TCTCAGTTTG CGGTTGATTG AAGTGCCTTG GGAGCAGGCA
TTGGCGATCA TTCTGCGGAT GGGGCGTTTG AAAGCTGAGC GCGAGGGGAC CGTGATGATG
GTCTTTACCG AACAGGAAAT TCAAGAAAGG CAGCAGCGGA CGAAACAGCA AGCTGCGCCA
GAAGCACTGG CTAACCTGAC ATTGGCATTG CAATACGCGA ATGCTGAACA GGTGGCTGAC
AGTTTGGATC CGCTGCAAGG TGGGCTGCTT TCTCCATTGG GCAGTGTGGT GGCCGATAAG
CGGACGAACA CATTATTGAT TCGCGATACG CCCGCTTCAC TGGCATTGTT AAAAAACTGG
CTGATTGAGA TGGATTTACC GTTACAACAA GTACAGTTAT CCGCGCATAT TGTGACCATC
AGCAGTGAAG ATTTACAAGA GCTGGGTGTG CGCTGGGGGA TGGGGGAGGG CAAGGGAAAC
ACCGCGCTCA GAATCAATGA TTTTAATGTC AATTTGCCGT TGCCAAATAG CGCCGCGAGC
GTGGGGTTTC ATGTGGCCCG TATTGGTGGC CGCCTGCTGG AGCTTGAGTT GAGTGCGTTG
GAGCAAGAGA ATCAGGTCGA TATTATTGCC AGCCCACGCT TAATTACTTC ACATCAACAA
ACCGCCAGTA TTAAACAAGG TTCTGATATT CCTTATACTG TCTCACGGGG TAAAAAAGAG
GCAGCGGCCA TTGAGTTCAA AGAAGCGGTG TTGGGGATGG AGGTCACACC CAAAATTCTA
CGTAATGGCA AAATCATCCT AGACCTAAAA ATTAGTCAAA ATATGCCCGG TATCACTATT
AAACGCGGTG AGAGTGAAAT GTTGCTAATA GATAAACAAG AAATTAAAAC ACAAGTTACT
GTAAACGATG GCGAAACCAT CGTGCTGGGC GGGATTTTCC AACAAAAAAA ACGCCAGAGT
GTTAATAAAG TCCCGTTACT GGCCGATATT CCACTATTAG GCGCGATGTT CAGGCAAGAT
ACTCAACAGC AAAGTCGGCG GGAGTTAGTG ATTTTCATTA CGCCAAAATT AATCAGTGCC
TGA
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| Protein sequence | MTIFIPAAGK QFSTWWCNLT NFNLVYFPGK NKHLNRSRGL ISLLIGCLLL MGVPSHSRSS
NSHLSDSKLS NSASSNSTSS NSVLSNNVSS SNISPNNASS SNASLPRTRS GGPVTLEFQD
APVSVILQAL ADYRQLNLIT TTGVGGNLSL RLIEVPWEQA LAIILRMGRL KAEREGTVMM
VFTEQEIQER QQRTKQQAAP EALANLTLAL QYANAEQVAD SLDPLQGGLL SPLGSVVADK
RTNTLLIRDT PASLALLKNW LIEMDLPLQQ VQLSAHIVTI SSEDLQELGV RWGMGEGKGN
TALRINDFNV NLPLPNSAAS VGFHVARIGG RLLELELSAL EQENQVDIIA SPRLITSHQQ
TASIKQGSDI PYTVSRGKKE AAAIEFKEAV LGMEVTPKIL RNGKIILDLK ISQNMPGITI
KRGESEMLLI DKQEIKTQVT VNDGETIVLG GIFQQKKRQS VNKVPLLADI PLLGAMFRQD
TQQQSRRELV IFITPKLISA
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