Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3654 |
Symbol | ugpA |
ID | 5802131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 3878995 |
End bp | 3879882 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641341465 |
Product | glycerol-3-phosphate transporter permease |
Protein accession | YP_001607977 |
Protein GI | 162420634 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.702231 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACCTT CTCGTCCCGG TTTTTCCTGT AGTTGGTTAC CTTATCTGTT GGTATTACCT CAATTGGCGA TCACCGCCAT CTTCTTCTTG TGGCCCGCGG GTGAAGCGCT GTGGTATTCA GTGCAAACGC TGGATCCATT TGGTCTCTCC AGTGAATTTG TCGGGCTGAG TAATTTTATT CAGCTATTTC AGGATGAGTA CTATCTGGCT TCGTTTTATA CCACGCTAAT TTTTAGCGCG TTGGTTGCGG GGATCGGCCT GATCGTTTCG CTGTTTTTGG CCGCAATGGT GAATTACGTT CTACGTGGCA GCCGTCTTTA CCAAACTTTA TTGATCCTCC CTTATGCGGT CGCCCCGGCG GTTGCGGCCG TGCTCTGGAT CTTCTTGTTT GACCCTGGAT TGGGTCTGAT AACCCATGCT CTGGCTAAGT TGGGTTATAG CTGGAACCAT GCGCAAAACA GCGGCCAGGC GATGTTTTTG GTGGTGTTAG CCTCGGTATG GAAGCAAATC AGCTACAACT TTTTATTCTT TCTGGCCGCG CTGCAATCTA TACCAAAATC ACTGGTTGAG GCTGCCGCTA TTGACGGTGC CGGGCCGGTA CGCCGTTTCT TCAATTTGGT ATTGCCGTTG ATTTCACCCG TCAGCTTCTT CCTGCTGGTG GTGAATCTGG TTTATGCCTT CTTTGATACT TTCCCGGTGA TTGACGCCGC TACTGGCGGT GGCCCAGTAC AAGCTACCAC CACGCTGATT TATAAAATTT ACCGCGAAGG TTTCGCCGGG TTGGATTTAT CCAGCTCCGC TGCCCAGTCG GTGATCCTGA TGTTACTGGT GATTGGCCTG ACGGTTATCC AGTTCCGCTT TGTTGAGCGT AAGGTGCGTT ACCAATGA
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Protein sequence | MSPSRPGFSC SWLPYLLVLP QLAITAIFFL WPAGEALWYS VQTLDPFGLS SEFVGLSNFI QLFQDEYYLA SFYTTLIFSA LVAGIGLIVS LFLAAMVNYV LRGSRLYQTL LILPYAVAPA VAAVLWIFLF DPGLGLITHA LAKLGYSWNH AQNSGQAMFL VVLASVWKQI SYNFLFFLAA LQSIPKSLVE AAAIDGAGPV RRFFNLVLPL ISPVSFFLLV VNLVYAFFDT FPVIDAATGG GPVQATTTLI YKIYREGFAG LDLSSSAAQS VILMLLVIGL TVIQFRFVER KVRYQ
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