Gene YpAngola_A3371 details

Gene Information

• Locus tag: YpAngola_A3371
• Symbol: agaF
• ID: 5801848
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pestis Angola
• Kingdom: Bacteria
• Replicon accession: NC_010159
• Strand: -
• Start bp: 3588863
• End bp: 3589303
• Gene Length: 441 bp
• Protein Length: 146 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 641341192
• Product: PTS system N-acetylgalactosamine-specific transporter subunit IIA component
• Protein accession: YP_001607714
• Protein GI: 162420432
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG2893] Phosphotransferase system, mannose/fructose-specific component IIA
• TIGRFAM ID: [TIGR00824] PTS system, mannose/fructose/sorbose family, IIA component

Plasmid Coverage information

• Num covering plasmid clones: 39
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 39
• Fosmid unclonability p-value: 0.530615
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATTGGGA TTGTTGTTTC TGGCCACATT AATTTTGCTT CTGGTATGGC TTCCGCAGTA 
CGGGCGATTA CCGGTGAGCA ATCTCAAATG CTGTTCATTG ATTTCGTTGA AAGTATGTCA 
ACAGACATGC TGGAAAGCGA ACTGCGCCGT GCGGCACATG AGGTAGACAG CGGCGAAGGT 
GTACTGTTTT TAACCGATAT TCCCGGTGGC TCACCTTGTA ATCGCGCACT GAATATTTTG 
ATGAGCGGCA GCAACGTTGA GCTGCTTGCC GGGGTTAACC TGCCAATGAT TGCGAATGCC 
GCCTTTGAAC GTGAAGGGGC TTCACTGTCA GAGCTGGTCG AAATACTGAT GGATATTGGC 
GCGTCCAGTG TACAGAACCT ACGGGCTGAG CTGGACACCG CTCTGGTTAC TGATAGCGGC 
GAAAACGAGG ATGGGCTCTA A 

 

Protein sequence

MIGIVVSGHI NFASGMASAV RAITGEQSQM LFIDFVESMS TDMLESELRR AAHEVDSGEG 
VLFLTDIPGG SPCNRALNIL MSGSNVELLA GVNLPMIANA AFEREGASLS ELVEILMDIG 
ASSVQNLRAE LDTALVTDSG ENEDGL