Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3314 |
Symbol | nqrD |
ID | 5801791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 3521409 |
End bp | 3522038 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641341137 |
Product | Na(+)-translocating NADH-quinone reductase subunit D |
Protein accession | YP_001607659 |
Protein GI | 162421488 |
COG category | [C] Energy production and conversion |
COG ID | [COG1347] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD |
TIGRFAM ID | [TIGR01939] NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0000436079 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTGATA GCAAAGAGAT TAAACGGGTC TTATTAAGCC CATTGTTTGA TAACAACCCG ATTGCCTTGC AAATCCTTGG GGTTTGCTCA GCACTGGCGG TGACCACTAA GCTGGAGACA GCATTAGTGA TGACTCTGGC AGTCACGCTG GTGACTGCGT TTTCGAGTTT CTTCATCTCA TTGATTCGAA ATCACATCCC AAACAGCGTA AGGATTATCG TTCAGATGGT CATCATTGCT TCGCTGGTGA TTGTGGTAGA CCAAGTATTA CGTGCTTATG CCTATGAAAT TTCCAAGCAG TTGTCGGTGT TCGTTGGCTT GATTATTACG AACTGTATCG TCATGGGCCG TGCTGAAGCT TATGCGATGA AATCACCGCC AATTGAAAGT TTTATGGATG GTATCGGTAA TGGCCTGGGG TACGGCGTAA TACTGGTTCT GGTCGGTTTT GTCCGCGAAT TGGTTGGTTC AGGCAAGCTA TTTGGCGTGA CGGTATTGGA AACGGTGCAA AACGGTGGGT GGTATCTACC TAACGGATTA TTCCTGCTGG CACCTAGTGC ATTCTTTATT ATTGGTCTGC TGATTTGGGG CCTACGGACC TTGAAACCTG CGCAGATTGA GAAGGAGTAA
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Protein sequence | MADSKEIKRV LLSPLFDNNP IALQILGVCS ALAVTTKLET ALVMTLAVTL VTAFSSFFIS LIRNHIPNSV RIIVQMVIIA SLVIVVDQVL RAYAYEISKQ LSVFVGLIIT NCIVMGRAEA YAMKSPPIES FMDGIGNGLG YGVILVLVGF VRELVGSGKL FGVTVLETVQ NGGWYLPNGL FLLAPSAFFI IGLLIWGLRT LKPAQIEKE
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