Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3308 |
Symbol | dinB |
ID | 5801785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 3515659 |
End bp | 3516717 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641341131 |
Product | DNA polymerase IV |
Protein accession | YP_001607653 |
Protein GI | 162421814 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00714145 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.00000429031 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCGAAAAA TTATTCATGT CGATATGGAT TGCTTCTTCG CGGCAGTAGA AATGCGCGAC GACCCTCGCC TGCGTGATAT CCCCCTTGCG ATTGGTGGCA GTAAGGAGCG GCGTGGCGTG ATCAGTACCG CTAATTATCC CGCTCGGCGT TATGGTGTTC GCAGCGCTAT GCCAACGGCG ATGGCGTTTA AACTCTGCCC ACAGTTAACA TTGCTGCCTG GTAGAATGGC GGCTTATAAA GAGGCCTCGC AGCATATTCG CGAAATTTTT GCCCGTTATA CTCCATTGAT TGAACCACTG TCATTGGATG AGGCCTATTT GGATGTTTCT GATAGCTTGG CGTGCGGTGG CTCTGCAACA TTAATCGCTC AAGAGATCCG CCAGTCTATC GCTAGTGAGC TGAACCTGAC AGCCTCCGCG GGGATTGCCC CGATAAAATT TCTTGCCAAA ATCGCCTCAG AGCTGAATAA ACCTAATGGC CAGTATGTGA TTACACCGAA TCAGATCCAG CCCTTCCTAC AGGATTTACC GCTGAGTAAA ATTCCCGGTG TTGGTGCCGT CACCGCCAAA CGTTTACAGG CGCTGGGGTT GGTAACCTGT GGCGATATAC AAAAATATCC ATTGGCAGAG TTGTTAAAAC ATTTTGGTAA GTTTGGTCGC GTATTGTGGG AGCGTAGTCA CGGTATTGAT GAACGTGAAA TATCCCCAGA TCGTCTACGT AAATCCGTTG GTGTGGAGAA AACACTGGCC GAGGATATTT ATGACTGGGA AAGTTGTGAG GCGTTGATCG AAGAACTTTA TCTTGAACTG GAAACTCGTT TACGTAAGGT AAAGCCGAGC CTACACATTG CCCGGCAGGG CGTTAAGCTA AAATTTCATG ATTTTCAGCA GACCACGCAA GAACACACAT GGCCAGTATT GAATAAAGTA GATTTACTGG AGATTGCCCA CGCCGCATGG CATGAACGGC GGGCCGAGCG GGGAGTCCGT TTGGTCGGGC TGCATGTTAC GTTGCTGGAT CCACAACTTG AGCGGCAATT ATTGCTTGAT TGGGGCTAG
|
Protein sequence | MRKIIHVDMD CFFAAVEMRD DPRLRDIPLA IGGSKERRGV ISTANYPARR YGVRSAMPTA MAFKLCPQLT LLPGRMAAYK EASQHIREIF ARYTPLIEPL SLDEAYLDVS DSLACGGSAT LIAQEIRQSI ASELNLTASA GIAPIKFLAK IASELNKPNG QYVITPNQIQ PFLQDLPLSK IPGVGAVTAK RLQALGLVTC GDIQKYPLAE LLKHFGKFGR VLWERSHGID EREISPDRLR KSVGVEKTLA EDIYDWESCE ALIEELYLEL ETRLRKVKPS LHIARQGVKL KFHDFQQTTQ EHTWPVLNKV DLLEIAHAAW HERRAERGVR LVGLHVTLLD PQLERQLLLD WG
|
| |