Gene YpAngola_A3293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A3293 
SymbolaroL 
ID5801770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp3499073 
End bp3499597 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content50% 
IMG OID641341117 
Productshikimate kinase II 
Protein accessionYP_001607639 
Protein GI162418402 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.431512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.133035 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAAA CTATCTTCAT GGTAGGCGCG CGCGGTGCGG GTAAGACCAC TATTGGGAAG 
GCATTGGCGC AGGCATTGGG GTATCGGTTT GTTGATACAG ATCTATTTAT GCAACAAACC
TCACAAATGA CCGTGGCTGA AGTTGTTGAG AGTGAAGGTT GGGATGGTTT TCGTCTACGT
GAAAGCATGG CACTACAGGC AGTAACGGCA CCTAAAACAG TCGTTGCCAC TGGTGGTGGT
GCGGTACTGT CCAGTGAAAA CCGCGCATTC ATGCGTGATC ATGGGCGAGT CATTTATCTG
CGGGCGTCTG CAGCCGTATT GGCAAAGCGG CTAGCGGAAG ATCCTGAAGA GGCTCAGCGG
CCAAGTTTAA CCGGTAAACC CATCGTTGAA GAAATACTGG ATGTGTTGGC TAGTCGTGAA
GCGTTGTATC AGGACGTCGC CCATCATGTA CTTGATGGAA CGCAAACCCC GTCACTGGTT
GTCGAACAAA TTTTACAGAT GTTGACTGGT GAGATGGTCA AATAA
 
Protein sequence
MTQTIFMVGA RGAGKTTIGK ALAQALGYRF VDTDLFMQQT SQMTVAEVVE SEGWDGFRLR 
ESMALQAVTA PKTVVATGGG AVLSSENRAF MRDHGRVIYL RASAAVLAKR LAEDPEEAQR
PSLTGKPIVE EILDVLASRE ALYQDVAHHV LDGTQTPSLV VEQILQMLTG EMVK