| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A3132 |
|---|
| Symbol | dapA |
|---|
| ID | 5801606 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | + |
|---|
| Start bp | 3319714 |
|---|
| End bp | 3320613 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641340966 |
|---|
| Product | dihydrodipicolinate synthase |
|---|
| Protein accession | YP_001607494 |
|---|
| Protein GI | 162419661 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.607074 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTACGG GAAGCCCAAT GTTTACAGGC AGCATAGTTG CGCTAATAAC GCCAATGGAC
GACAACGGTG ATGTCGATCG TGCAAGCCTG AAGAGCCTGA TTGATTACCA CGTGGCCAGT
GGGACTGCGG CGATTGTCTC TGTGGGGACG ACGGGTGAGT CAGCAACGTT GAATCATGAT
GAGCATGTCG ATGTGGTCAT GCAGACACTC GAACTGGCTG ATGGCCGGAT CCCGGTGATT
GCCGGAACAG GGGCCAATTC CACCTCCGAA GCCATTTCTC TCACTCAACG GTTTAATGAT
ACCGGTGTTG TGGGCTGCTT AACAGTGACG CCATATTATA ACCGGCCAAT GCAGGAAGGG
TTATACCAAC ACTTTAAAGC GATCGCTGAA AGTACCGATT TGCCACAAAT TCTTTATAAT
GTGCCTTCGC GTACGGGTTG CGATATGTTA CCGCCAACCA TTGCTCGCTT AGCGAAGATT
AAAAATATTG TTGCTGTTAA AGAAGCCACA GGGAACTTAA GTCGGGTTAG TCAGATCCAA
GTGCTGGTTG ATGATGAAGA TTTCATCCTG CTCAGTGGTG ATGATGCGAG TGGACTGGAC
TTTATGCAAC TGGGTGGTAA AGGTGTTATT TCTGTGACGG CAAATATCGC TGCCCGTGAA
ATGGTTGAAC TGTGCGCATT AGCAGCACAG GGAAATTTCG CCGAAGGTCG CCGTTTGAAT
CAGCGCTTGA TGCCGTTGCA TCAGCATTTA TTTGTAGAAG CAAACCCAAT TCCGGTTAAA
TGGGCCGCGA AGAGGTTGGG ATTAATGGCA AATGATACTA TGCGCCTGCC AATGACCCCA
CTGACTGATC CGGCCAAACG GATTGTGGAA GACGCGTTGA AAAGCGCAGG TTTGCTGTAA
|
|---|
| Protein sequence | MFTGSPMFTG SIVALITPMD DNGDVDRASL KSLIDYHVAS GTAAIVSVGT TGESATLNHD
EHVDVVMQTL ELADGRIPVI AGTGANSTSE AISLTQRFND TGVVGCLTVT PYYNRPMQEG
LYQHFKAIAE STDLPQILYN VPSRTGCDML PPTIARLAKI KNIVAVKEAT GNLSRVSQIQ
VLVDDEDFIL LSGDDASGLD FMQLGGKGVI SVTANIAARE MVELCALAAQ GNFAEGRRLN
QRLMPLHQHL FVEANPIPVK WAAKRLGLMA NDTMRLPMTP LTDPAKRIVE DALKSAGLL
|
|---|
| |