| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A3098 |
|---|
| Symbol | baeR |
|---|
| ID | 5801572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | - |
|---|
| Start bp | 3273411 |
|---|
| End bp | 3274130 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641340934 |
|---|
| Product | DNA-binding transcriptional regulator BaeR |
|---|
| Protein accession | YP_001607462 |
|---|
| Protein GI | 162420800 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0001052 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 71 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGAGT CGCCTCTGTC TGCCAGCCAG TCTGGCTCTG TATTGATCGT TGAAGATGAA
CCCAAACTTG GCCAGCTACT CGTCGATTAC CTGCAAGCCG CGGGTTACCG CACCCAGTGG
CTGACCAACG GGGCAGAAGT CGTGGCGACG GTTCGCCAAA CGCCACCCGC CATCATCTTG
CTGGATCTCA TGCTGCCCGG CAGTGATGGC ATCACCCTAT GCCGTGAAAT CCGCCGTTTC
TCTGATATTC CTATTGTCAT GGTGACGGCA AAAACGGAAG AGATTGATAG GCTATTGGGG
CTGGAGATTG GCGCTGATGA CTATATCTGC AAGCCCTATA GCCCACGGGA AGTGGTCGCT
CGGGTCAAAA CCATTCTACG CCGCTGCTCT CAGCAACGTC ATCAACCCAC CGATGACGCA
CCACTGCTGA TCAATGAATC CCGTTTTCAG GCGAGTTACC AAGGGCATAT GCTGGAATTA
ACCCCGGCAG AATTCCGCTT ACTGAAAATA TTAGCCTCCC AACCGGGCCA TGTTTTCAGC
CGGGAACAAC TGCTGAACAA CCTTTACGAC GATTACCGGG TAGTGACTGA TCGCACCATT
GACAGCCATA TCAAAAATCT ACGGCGGAAA CTGGAATTAC TCGATGGCGA AAAACCGTTC
ATCCGCGCGG TATATGGCAT GGGGTATCGC TGGGAAGCAG AGATGTGCCG TTTGTTGTAA
|
|---|
| Protein sequence | MHESPLSASQ SGSVLIVEDE PKLGQLLVDY LQAAGYRTQW LTNGAEVVAT VRQTPPAIIL
LDLMLPGSDG ITLCREIRRF SDIPIVMVTA KTEEIDRLLG LEIGADDYIC KPYSPREVVA
RVKTILRRCS QQRHQPTDDA PLLINESRFQ ASYQGHMLEL TPAEFRLLKI LASQPGHVFS
REQLLNNLYD DYRVVTDRTI DSHIKNLRRK LELLDGEKPF IRAVYGMGYR WEAEMCRLL
|
|---|
| |