Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A2571 |
Symbol | sodB |
ID | 5801042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 2690276 |
End bp | 2690854 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641340440 |
Product | superoxide dismutase |
Protein accession | YP_001606982 |
Protein GI | 162419501 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0605] Superoxide dismutase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.489375 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTTTG AATTACCTGC ATTACCTTAC GCGCAAAATG CGCTGGAACC CCACATCTCT GCCGAAACGC TGGAATACCA TTATGGTAAG CACCACAACA CCTATGTGAT CAACCTCAAT AATCTGATTA AAGATACTGA GTTTGCAGGC AAATCACTGG AAGAGATCGT GAAAACCGCC AATGGCGGTG TGTTTAATAA TGCGGCCCAA GTTTGGAACC ATACCTTCTA CTGGCATTGC CTGTCGCCAA ATGGAGGCGG TGAACCTACT GGAAAAATCG CCGAGGCCAT TAATAAGTCT TTTGGCTCAT TTGCTGAATT TAAAGCGCAA TTTACTGATG CTGCCGTGAA AAACTTTGGC GCTGGTTGGA CGTGGCTCGT TAAAAAAGCG GATGGGACAT TGGCGATTGT CAGTACTTCT AACGCAGGAA CACCGCTGAC AACAACAGAT AAACCCCTGT TGACCGTCGA TGTGTGGGAA CATGCTTACT ATATTGATTA CCGTAATGCG CGACCAAAAT ATCTGGAGAA TTTCTGGGCA GTAGTTAACT GGTCTTTCGC TGAGAAAAAC CTAGACTGA
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Protein sequence | MSFELPALPY AQNALEPHIS AETLEYHYGK HHNTYVINLN NLIKDTEFAG KSLEEIVKTA NGGVFNNAAQ VWNHTFYWHC LSPNGGGEPT GKIAEAINKS FGSFAEFKAQ FTDAAVKNFG AGWTWLVKKA DGTLAIVSTS NAGTPLTTTD KPLLTVDVWE HAYYIDYRNA RPKYLENFWA VVNWSFAEKN LD
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