Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A2568 |
Symbol | rnt |
ID | 5801039 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 2687268 |
End bp | 2687948 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641340437 |
Product | ribonuclease T |
Protein accession | YP_001606979 |
Protein GI | 162420848 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | [TIGR01298] ribonuclease T |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000324213 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGCTG AATTCGATAA AGATAAGAAA CTGATGGCAG ACAAAAGTGA CCTTAACGCC CTGAGTGGCC GTTTTCGTGG GTATTACCCA GTAGTAATTG ATGTAGAAAC CGCAGGTTTT AATGCCCAAA GTGATGCATT ACTCGAGATT GCCGCAGTAA CCTTGCAGAT GAATAAAGAG GGCTGGCTGC TACCTGATGA AACGTTGCAC TTCCATGTGG AACCTTTCGA AGGTGCCAAC CTGCAGCCAG AGGCGCTGGC CTTTAATGGG ATCGATCCAA CAAATCCTCT ACGCGGTGCC GTCAGCGAAC ATGATGCCTT GCATGCCATT TTTAAAGCCG TGCGTAAGGG AATCAAAGAT AAAGGCTGTA ACCGGGCCAT AATCGTGGCA CACAATGCCA ATTTTGATCA CAGCTTTGTT ATGGCTGCCG CTGAACGTGC CAGCTTGAAG CGGAACCCGT TCCACCCGTT TGCCACTTTC GATACCGCCG CTCTCAGTGG GTTGGTATTG GGGCAAACCG TGCTGGCAAA AGCTTGCCTG GCCGCAGGTA TCCCGTTTGA CAGTAGTCAG GCGCACTCTG CATTGTACGA CACCCTGCAA ACGGCGAAAC TATTTTGTGA GTTGGTTAAT CGCTGGAAAA AACTGGGTGG CTGGCCGTTG CCAGCGGCAG AATCGGGGTA A
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Protein sequence | MHAEFDKDKK LMADKSDLNA LSGRFRGYYP VVIDVETAGF NAQSDALLEI AAVTLQMNKE GWLLPDETLH FHVEPFEGAN LQPEALAFNG IDPTNPLRGA VSEHDALHAI FKAVRKGIKD KGCNRAIIVA HNANFDHSFV MAAAERASLK RNPFHPFATF DTAALSGLVL GQTVLAKACL AAGIPFDSSQ AHSALYDTLQ TAKLFCELVN RWKKLGGWPL PAAESG
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