Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A2236 |
Symbol | pyrF |
ID | 5800706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 2339517 |
End bp | 2340254 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641340136 |
Product | orotidine 5'-phosphate decarboxylase |
Protein accession | YP_001606681 |
Protein GI | 162419826 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00950632 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.00992916 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGTCCG CAACTAAAAC TAATAACAGT GGCTCAATAT CCTCCCCAAT TGTTGTTGCG TTGGATTATG CCAATAAAGA CGCTGCGTTA GCCTTTGCTG ATCAGGTTAG TCCACAGGAT TGCCGGTTAA AAGTGGGCAA AGAGATGTTT ACGTTGTACG GCCCCGAGCT TATCCGTGAC TTACATCAGC GCGGCTTTGA CGTATTTCTT GATTTGAAAT TCCATGACAT CCCTAATACT ACCGCGCGTG CCGTGGCTGC GGCAGCAGAG TTGGGGGTCT GGATGGTCAA TGTTCATGCC AGTGGCGGTG CCCGCATGAT GTCGGCGGCG AAAGAAGCCT TGTTGCCTTA TGGTGCACAA GCCCCCTTAC TGATTGCCGT TACTGTACTG ACCAGCATGG ATGGCGAAGA TCTGCGGGAT ATCGGTATTA CTATCAGTCC GGCTGAGCAG GCCGAGCGGT TAGCGAAACT GACCTGGGAT TGCGGTTTGG ATGGCGTGGT GTGCTCGGCT CATGAAGCGG TGCGTTTGAA GCAAGTTTGT GGCGAAGACT TCTCGCTCGT TACCCCAGGT ATTCGCCCAC AAGGCAGTGA AGCCGGTGAC CAGCGGCGGA TCATGACACC TGAACAGGCG GTAGCTGTAG GTGTTGATTA CATGGTAATC GGTCGCCCAA TTACACAATC TCCTGATCCG GAAAAAACGC TGCGCGAAAT ATTGGCATCA CTGACGAAGG TGGCATAA
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Protein sequence | MTSATKTNNS GSISSPIVVA LDYANKDAAL AFADQVSPQD CRLKVGKEMF TLYGPELIRD LHQRGFDVFL DLKFHDIPNT TARAVAAAAE LGVWMVNVHA SGGARMMSAA KEALLPYGAQ APLLIAVTVL TSMDGEDLRD IGITISPAEQ AERLAKLTWD CGLDGVVCSA HEAVRLKQVC GEDFSLVTPG IRPQGSEAGD QRRIMTPEQA VAVGVDYMVI GRPITQSPDP EKTLREILAS LTKVA
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