Gene YpAngola_A2152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A2152 
Symbol 
ID5800622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp2250371 
End bp2250910 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content43% 
IMG OID641340059 
Productattachment invasion locus protein precursor 
Protein accessionYP_001606604 
Protein GI162421248 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3637] Opacity protein and related surface antigens 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.224676 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.023578 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATGGA TTACGACATT AGCGCCTCTT TCACTCGCAT TATCTTTGGG TATCTCGGTG 
GCGAATGCTG CCAGTGATGC TAGCAACACG GTATCTTTCG GTTACGCTCA GAGTACGCTA
AAAATTGATG GGGAGAAAAT TGGAAAAGAT AATAAAGGTT TTAATCTAAA GTATCGCCAT
GAGTTAGATT CAGTACTTGG CATTGTCGCC TCTTTTACCC ATACCAAGCA AAACTACGGT
ATGCCTGGAG ATAGCGATGG GAAGAGAAAG GTTGAGTATT ATTCTTTGAT GGTGGGTCCT
AGTTGGCGCT TTAATGAATT CGTCAGTGCC TACGCATTAA TAGGTGCAAC CCAAGGTAAG
AGTACACACA CTAAGCCGCG TATGGTAAGC AACACTGTTA GCAAAACAAG CATGGGGTAT
GGTGCTGGCT TGCAGTTCAA TCCGGTAAAA CACGTTGCTA TTGATACAGC TTATGAATAC
GCCAAAATAG AGGATGTAAA AATAGGAACT TGGATTGTGG GGGGTGGTTA CCGCTTCTAA
 
Protein sequence
MKWITTLAPL SLALSLGISV ANAASDASNT VSFGYAQSTL KIDGEKIGKD NKGFNLKYRH 
ELDSVLGIVA SFTHTKQNYG MPGDSDGKRK VEYYSLMVGP SWRFNEFVSA YALIGATQGK
STHTKPRMVS NTVSKTSMGY GAGLQFNPVK HVAIDTAYEY AKIEDVKIGT WIVGGGYRF