| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A2030 |
|---|
| Symbol | dcyD |
|---|
| ID | 5800499 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | + |
|---|
| Start bp | 2116975 |
|---|
| End bp | 2117994 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641339949 |
|---|
| Product | D-cysteine desulfhydrase |
|---|
| Protein accession | YP_001606499 |
|---|
| Protein GI | 162420161 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2515] 1-aminocyclopropane-1-carboxylate deaminase |
|---|
| TIGRFAM ID | [TIGR01275] pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCATC AATTCCTTGG GGGGCACGTG ACGCTTCAAC AAAAACTGAC GCAATTCCCG
CGTCTCGATC TGGTCGGTAA TGCGACGCCA TTAGAAAAAC TGTCTCGTCT ATCTGATTAT
CTGGGACGTG AAATTTACAT TAAACGTGAT GATGTCACGC CTGTGGCGCT TGGCGGGAAT
AAACTGCGCA AGCTAGAATT CTTAGCCGCA GATGCCTTGA GACAGGGAGC CGATACGCTG
GTTACGGCTG GTGCTATTCA ATCTAATCAT GTCCGCCAAA CCGCCGCCGT GGCCGCGAAA
CTGGGGCTGC ATTGCGTTGC GCTGTTGGAA AACCCCATTG GTACTGAGCA GGCAAACTAT
CTGACCAATG GGAACCGGCT GTTACTGGAC CTATTCAATG TTGATGTTGT GATGTGTGAG
GCATTGAACG ATCCAAATCA GCAATTAGCA GAATTGGCTA CCCGCGTGGA AGCGCAGGGT
TTCCGCCCAT ATGTGGTACC GATTGGCGGT TCTAATGCCT TGGGCGCGCT GGGTTATGTG
CAGTGCTCAC TGGAAATTGC TGCTCAAGCC GCGGGCAATG TTGCGTTTAG TTCGGTCGTC
GTGGCCTCTG GCAGTGCGGG AACACATGCA GGATTGGCGG TTGGTCTACA GCAGTTGTTA
CCCGATGCGG AATTAATCGG TGTGACGGTA TCACGTAGTG CCGATGAACA GCGGCCTAAA
GTGGCACAGA TTCAACAAGC GTTGGCGACA TCATTAGGGA TGACGGACCC ATTGGCAAAA
ATCACCTTGT GGGATAGTTA TTTTGCCCCG CAATATGGGA TGCCAAACGA AGAGGGGATA
GCGGCTATTA AGCTCTTGGC AAGACTGGAA GGAATATTGT TGGACCCTGT GTATACCGGT
AAGGCGATGG CGGGCTTACT TGATGGTATT GAACAGCAAA AATTCTGCGA CAAAGGGCCA
ATTTTATTTA TCCACACTGG CGGGGCACCT GCGCTGTTTG CTTATCATCC GCAGGTGTAG
|
|---|
| Protein sequence | MIHQFLGGHV TLQQKLTQFP RLDLVGNATP LEKLSRLSDY LGREIYIKRD DVTPVALGGN
KLRKLEFLAA DALRQGADTL VTAGAIQSNH VRQTAAVAAK LGLHCVALLE NPIGTEQANY
LTNGNRLLLD LFNVDVVMCE ALNDPNQQLA ELATRVEAQG FRPYVVPIGG SNALGALGYV
QCSLEIAAQA AGNVAFSSVV VASGSAGTHA GLAVGLQQLL PDAELIGVTV SRSADEQRPK
VAQIQQALAT SLGMTDPLAK ITLWDSYFAP QYGMPNEEGI AAIKLLARLE GILLDPVYTG
KAMAGLLDGI EQQKFCDKGP ILFIHTGGAP ALFAYHPQV
|
|---|
| |