| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A1994 |
|---|
| Symbol | |
|---|
| ID | 5800464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | + |
|---|
| Start bp | 2081872 |
|---|
| End bp | 2083944 |
|---|
| Gene Length | 2073 bp |
|---|
| Protein Length | 690 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641339917 |
|---|
| Product | invasin domain-containing protein |
|---|
| Protein accession | YP_001606467 |
|---|
| Protein GI | 162419445 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGAGG ATATTTATTT TGGTAAAGAT AATCTGCAAC GCAACCCTTA TGCCGTGACT
GCCGGGATCA ATTACACCCC CGTGCCTCTA CTCACTGTCG GGGTAGATCA GCGTATGGGG
AAAAGCAGTA AGCATGAAAC ACAGTGGAAC CTCCAAATGA ACTATCGCCT GGGCGAGAGT
TTTCAGTCGC AACTTAGCCC TTCAGCGGTG GCGGGAACAC GTCTACTGGC TGAGAGCCGC
TATAACCTTG TCGATCGTAA CAATAATATC GTGTTGGAGT ATCAGAAACA GCAGGTGGTT
AAACTGACAT TATCGCCAGC AACTATCTCC GGCCTGCCGG GTCAGGTTTA TCAGGTGAAC
GCACAAGTAC AAGGGGCATC TGCTGTAAGG GAAATTGTCT GGAGTGATGC CGAACTGATT
GCCGCTGGCG GCACATTAAC ACCACTGAGT ACCACACAAT TCAACTTGGT TTTACCGCCT
TATAAACGCA CAGCACAAGT GAGTCGGGTA ACGGACGACC TGACAGCCAA CTTTTATTCG
CTTAGTGCGC TCGCGGTTGA TCACCAAGGA AACAGATCTA ACTCATTCAC ATTGAGCGTC
ACCGTTCAGC AGCCTCAGTT GACATTAACG GCGGCCGTCA TTGGTGATGG CGCACCGGCT
AGTGGGAAAA CTGCAATCAC CGTTGAGTTC ACCGTTGCTG ATTTTGAGGG GAAACCCTTA
GCCGGGCAGG AGGTGGTGAT AACCACCAAT AATGGTGCGC TACCGAATAA AATCACGGAA
AAGACAGATG CAAATGGCGT CGCGCGCATT GCATTAACCA ATACGACAGA TGGCGTGACG
GTAGTCACAG CAGAAGTGGA GGGGCAACGG CAAAGTGTTG ATACCCACTT TGTTAAGGGT
ACTATCGCGG CGGATAAATC CACTCTGGCT GCGGTACCGA CATCTATCAT CGCTGATGGT
CTAATGGCTT CAACCATCAC GTTGGAGTTG AAGGATACCT ATGGGGACCC GCAGGCTGGC
GCGAATGTGG CTTTTGACAC AACCTTAGGC AATATGGGCG TTATCACGGA TCACAATGAC
GGCACTTATA GCGCACCATT GACCAGTACC ACGTTGGGGG TAGCAACAGT AACGGTGAAA
GTGGATGGGG CTGCGTTCAG TGTGCCGAGT GTGACGGTTA ATTTCACGGC AGATCCTATT
CCAGATGCTG GCCGCTCCAG TTTCACCGTC TCCACACCGG ATATCTTGGC TGATGGCACG
ATGAGTTCCA CATTATCCTT TGTCCCTGTC GATAAGAATG GCCATTTTAT CAGTGGGATG
CAGGGCTTGA GTTTTACTCA AAACGGTGTG CCGGTGAGTA TTAGCCCCAT TACCGAGCAG
CCAGATAGCT ATACCGCGAC GGTGGTTGGG AATACCGCCG GTGATGTCAC AATCACGCCT
CAGGTTGATA CCCTGATACT GAGTACATTG CAGAAAAAAA TATCCCTATT CCCGGTACCT
ACGCTGACCG GTATTCTGGT TAACGGGCAA AATTTCGCTA CGGATAAAGG GTTCCCGAAA
ACGATCTTTA AAAACGCCAC ATTCCAGTTA CAGATGGATA ACGATGTTGC TAATAATACT
CAGTATGAGT GGTCGTCGTC ATTCACACCC AATGTATCGG TTAACGATCA GGGTCAGGTG
ACGATTACCT ACCAAACCTA TAGCGAAGTG GCTGTGACGG CGAAAAGTAA AAAATTCCCA
AGTTATTCGG TGAGTTATCG GTTCTACCCA AATCGGTGGA TATACGATGG CGGCACTTCG
CTGGTATCGA GTATCGAGGC CAGCAGACAA TGCCAAGGTT CAGATATGTC TGCGGTTCTT
GAATCCTCAC GTGCAACCAA CGGAACGCGT GCGCCTGACG GGACATTGTG GGGCGAGTGG
GGGAGCTTGA CCGCGTATAG TTCTGATTGG CAATCTGGCG AATATTGGGT CAAAAGGACC
AGCACGGATT TTGAAACCAT GAATATGAAC ACTGGCGTGC TGCAACCAGG GCCTGCATAC
TTGGCGTTCC CGCTCTGTGC GCTGTCAATA TAA
|
|---|
| Protein sequence | MPEDIYFGKD NLQRNPYAVT AGINYTPVPL LTVGVDQRMG KSSKHETQWN LQMNYRLGES
FQSQLSPSAV AGTRLLAESR YNLVDRNNNI VLEYQKQQVV KLTLSPATIS GLPGQVYQVN
AQVQGASAVR EIVWSDAELI AAGGTLTPLS TTQFNLVLPP YKRTAQVSRV TDDLTANFYS
LSALAVDHQG NRSNSFTLSV TVQQPQLTLT AAVIGDGAPA SGKTAITVEF TVADFEGKPL
AGQEVVITTN NGALPNKITE KTDANGVARI ALTNTTDGVT VVTAEVEGQR QSVDTHFVKG
TIAADKSTLA AVPTSIIADG LMASTITLEL KDTYGDPQAG ANVAFDTTLG NMGVITDHND
GTYSAPLTST TLGVATVTVK VDGAAFSVPS VTVNFTADPI PDAGRSSFTV STPDILADGT
MSSTLSFVPV DKNGHFISGM QGLSFTQNGV PVSISPITEQ PDSYTATVVG NTAGDVTITP
QVDTLILSTL QKKISLFPVP TLTGILVNGQ NFATDKGFPK TIFKNATFQL QMDNDVANNT
QYEWSSSFTP NVSVNDQGQV TITYQTYSEV AVTAKSKKFP SYSVSYRFYP NRWIYDGGTS
LVSSIEASRQ CQGSDMSAVL ESSRATNGTR APDGTLWGEW GSLTAYSSDW QSGEYWVKRT
STDFETMNMN TGVLQPGPAY LAFPLCALSI
|
|---|
| |