Gene YpAngola_A1980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A1980 
SymbolasnC 
ID5800450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp2062308 
End bp2063708 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content50% 
IMG OID641339903 
Productasparaginyl-tRNA synthetase 
Protein accessionYP_001606453 
Protein GI162419705 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0017] Aspartyl/asparaginyl-tRNA synthetases 
TIGRFAM ID[TIGR00457] asparaginyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000244559 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.95853 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTAG TGCCTGTAGT CGACGTACTG CAAGGCCGCG CCGCGGTTGG CAGTGAAGTC 
ACCGTGCGCG GTTGGGTGCG TACCCGGAGA GATTCTAAAG CGGGTATCTC CTTCGTTGCC
GTTTATGACG GTTCCTGCTT TGACCCGTTA CAGGCCGTCG TGAATAATAC TTTGCCGAAT
TATCAGGATG AAGTACTGCA TCTGACCACC GGTTGTTCCG TTGAAGTCAC CGGTACCGTG
GTCGCATCAC CGGGTGAAGG CCAAAGTTTT GAAATTCAAG CAACCGCCAT CAACGTAGTA
GGCTGGGTTG ATGATCCGGA TACCTACCCG ATGGCCGCAA AACGTCACAG CATTGAATAT
TTGCGTGAAG TGGCTCACTT ACGCCCGCGT ACTAACCTGA TTGGTGCCGT TGCCCGTGTT
CGCCACACGT TGGCACAAGC AATCCACCGC TTCTTCGACG AAAATGGGTA TTTCTGGGTT
TCTACACCAC TGATCACCGC CTCTGATACT GAAGGCGCAG GTGAGATGTT CCGTGTTTCA
ACTTTAGATC TGGAAAACTT GCCACGCACG GATACCGGTG CTGTCGATTT CAGCGAAGAC
TTCTTCGGTA AAGAAGCGTT CCTGACCGTA TCGGGTCAGC TAAACGGTGA AACCTACGCC
TGTGCATTAT CAAAGGTTTA CACCTTTGGC CCAACCTTCC GGGCTGAAAA CTCCAATACC
AGCCGCCATT TGGCTGAATT CTGGATGGTT GAGCCGGAAG TGGCCTTCGC TTCTCTGGAT
GATGTCGCCG GTTTGGCTGA GAAAATGTTG AAATACGTTT TCCAGGCGGT CTTGAATGAA
CGTGCTGATG ACATGAAGTT CTTTGCCGAA CGTGTCGATA AAGACGCGGT TGACCGCCTG
CAACGTTTCG TCACCTCTGA TTTTGCTCAG GTTGACTACA CTGATGCCAT TGAGATCTTG
CTGGCATCCG GTCAGAAGTT TGAGAATGAT GTTTCATGGG GTATTGATTT GTCCTCTGAA
CATGAGCGTT ATCTGGCTGA GAAACACTTT AAAGCGCCGG TGGTGGTTAA AAACTATCCG
AAAGATATTA AAGCCTTCTA TATGCGAATG AATGAAGATG GCAAAACCGT TGCGGCGATG
GATGTTTTAG CGCCGGGTAT TGGTGAAATC ATCGGTGGTT CACAACGTGA AGAGCGTTTA
GATGTCTTGG ATGCGCGTTT AGCCGAAATG GGCCTGAATA AAGAAGATTA TTGGTGGTAT
CGTGATCTGC GTCGCTACGG CACTGTACCG CATTCAGGTT TTGGCCTCGG ATTTGAGCGT
TTAATCTCAT ATGTCACTGG GGTTCAAAAC GTTCGGGACG TTATTCCGTT CCCACGCACA
CCGAGAAATG CCAGTTTCTA A
 
Protein sequence
MSVVPVVDVL QGRAAVGSEV TVRGWVRTRR DSKAGISFVA VYDGSCFDPL QAVVNNTLPN 
YQDEVLHLTT GCSVEVTGTV VASPGEGQSF EIQATAINVV GWVDDPDTYP MAAKRHSIEY
LREVAHLRPR TNLIGAVARV RHTLAQAIHR FFDENGYFWV STPLITASDT EGAGEMFRVS
TLDLENLPRT DTGAVDFSED FFGKEAFLTV SGQLNGETYA CALSKVYTFG PTFRAENSNT
SRHLAEFWMV EPEVAFASLD DVAGLAEKML KYVFQAVLNE RADDMKFFAE RVDKDAVDRL
QRFVTSDFAQ VDYTDAIEIL LASGQKFEND VSWGIDLSSE HERYLAEKHF KAPVVVKNYP
KDIKAFYMRM NEDGKTVAAM DVLAPGIGEI IGGSQREERL DVLDARLAEM GLNKEDYWWY
RDLRRYGTVP HSGFGLGFER LISYVTGVQN VRDVIPFPRT PRNASF