Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A1934 |
Symbol | |
ID | 5800404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 2003269 |
End bp | 2005893 |
Gene Length | 2625 bp |
Protein Length | 874 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641339858 |
Product | hypothetical protein |
Protein accession | YP_001606408 |
Protein GI | 162421327 |
COG category | [S] Function unknown |
COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01646] Rhs element Vgr protein [TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.652792 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.85907 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTATC TATTGGGTGA GCCTGCGCTG GTACTGTCTA AGTTGGAAGG CGAGGAAGCC TTTTCGACTT TATATTCTTA TACTATTACG GCAAAGACAC CGGCTAACCC ATTAATTCCT TGGCAAGCGG CTTCAAATGT CGATCTCAAA TCCTTAATTG GTAAAGAGAT GACGATTGAA ATGGAACTGG ACGGCAACGG CCTGGGTGAT GTGAGAAGTG TAGGTAAAGG CACGCGTGAA ATTACGGGGC TGGTTGAGAG AGCCAGATAC ATTGGTCGAG ATGCCAATCA GGCCATATTT GAGATCACTA TTAAGCCTTG GTTCTACCTG GCTAATTTAA CCTCTGACTT TAAAATTTAT CAAAATAAAA ATGTCGTTGA TATTATAGAG GAAGTGTTCT CAGACTATAA TTTTCCGTTT GAGAAACGGT TGGCTACAAC CTATCCGATA TTAGATTTTC AGGTTCAGTA CGGTGAAACC GACTTTAATT TCCTTCAGCG TTTGATGGAA GAGTGGGGTA TTTACTGGTT CTTTGAGCAT CAGGATCATA AACAAAAATT AATTCTTGTG GATCATGTCG GTGCGCATAA ACGCTCGTTC AGTACCGCCT ACCATGCCAT TGAGTACTTG TCGGATGAGC CTAAAGCGGG CGAAGAGTAC ATCACACAAT TCCAGACTCA GGAAACCTTG ACGAGTGGGA CCTGGGTCAC CAACGATTAT GACTTCACGA AATCCCGTGC CGATATTCTG GCAATGGACA GTAAACCGCG TAAAACCAGC TTTAACGATC TCGAGATTTA TCACTGGCCA GGGGATTATG ATCAGCCAGA TATTGGTGAG CACCTTTCAC GCGTGCGTAT CGAAGAACGT GGTGCTCTGG GTTCGCGGGC GGTCGGTTCT GGTCAACTGC GCGGGATAGT TTGTGGTGCT AACTTCGAGC TGAAAGGGTT CCCCGTTGAT AAAGCGAATC GGGAATACAT GATTATCTCC AGCCGTTTGA CGGTGGCTGA AGTTGATCAA CTGTCTGGCG GTGAGGATGC GTTTAGTTGC GAGAGTTCTT TCACGGTTCA GCCGACGACC AAAATCTATC GTCACCCACA GGTGACACCA AAACCGAAAA CCAATGGGCC GCAAAACGCC ATTATTGTGG GGCCACCGGG TGAAGAGATT TGGACCGATG AATATGGCCG CGTAAAAGTG CGTTTCGTTT GGGATCGCTA TGGCACAAAC AGCGAGTCAG ACTCTTGCTG GCTACGTGTT AGCCAGGCTT GGGCAGGGAA CAGCTTTGGT GGGATCTATA TTCCACGCAT TGGTCAGGAA GTCATTGTTG ACTGTATTAA CGGCGATCCT GACCGGCCAA TGGTGATGGG CAGCCTTTAT AATAACGTGA CGCGTCCCCC TTGGGACCTG CCTGCCAATG CGACGCAAAG TGGCATGGTC AGTCGTACCG TTGGCGGCGG GTTAACCAAC TATAACGGCG TTCGTTTTGA AGATAAATCG GGGCTGGAGC AGTACTGGGA ACAGGCCGAG CGCGATATGT CGCGTTTGAC TAAAAATAAT GAAACGCAAA TTATCGGTGC CGATTCTGTC CTGAATGTAG GGGCCAACCG AAGTGAAGTT GTCGGGGCCA ATTATAACCA AGATGTTCTT GGCACATCAA TGTTAGCCAT CGGTGCAGCC TCTATGCTAC AGGTGGGATT GGCGCGTAGC GTTGTGGTTG GCGGAGCACA TTCACTGAAT GTGGTTTTGG CGAATGCCAC CAATGTGGGT GGCGCTAACA TGACCAACGT AGGGGGGTTT AATGGCCTTG CGGTGGGGGG AGCCCATCAG ACAGCTGTAG GCGGTGCTGC GACACTGGCT GCCGGCGGCC CTATTGCTAT TGGGGCGGGT GGTGAGCTTA TCCTCAGTGG GGATATCGTA AAAATTGTTG GTAAAAGTAA GGTTATTATT CAGGGCGGTG AAGTTCACAT TAACTCTGAT GATTGTTGTG GTCGTAAAAC GGGCAATGGC GGCGGGGCAT TCGGTGCCTT TGCGAGCCTG GCAGGTTTAT TGCCGCTGGC GGGTGCTATT GCCTTACCGC TACCGTTACC CTTGTTGCCA ATAGTGGTGC CACCAGTGAC ATCGCCACCG GATCCGACAT TGCCACCAGA TCCAACGTTG CCACCAGATC CAACGTTACC GCCGGAAACC ACGGCACCGC CAGAAACAAC GGCACCGCCA GAGACAACGG CACCGCCGGA AACAACGGCA CCGCCAGAGA CAACGGCACC GCCAGAGACA ACGGCACCGC CAGAAACAAC GGCACCGCCG GAAACAACGG CACCGCCGGA AACAACGGCA CCGCCGGAAA CAACGGCACC GCCGGAAACA ACGGCACCGC CGGAAACCAC GGCACCGCCA GAGACAACGG CACCGCCAGA GACAACGGCA CCGCCAGAGA CAACGGCACC GCCGGAAACC ACGGCACCGC CAGAAACCAC GGCACCGCCG GAAACAACGG CACCGCCGGA AACAACGGCA CCGCCAGAAA CAACGGCACC GCCGGAAACA ACGGCACCGC CAGAAACAAC GGCACCGCCG GAACCGACGC GAACACCGCC AGGGACGCAG ACGCCACCGC CTTGA
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Protein sequence | MPYLLGEPAL VLSKLEGEEA FSTLYSYTIT AKTPANPLIP WQAASNVDLK SLIGKEMTIE MELDGNGLGD VRSVGKGTRE ITGLVERARY IGRDANQAIF EITIKPWFYL ANLTSDFKIY QNKNVVDIIE EVFSDYNFPF EKRLATTYPI LDFQVQYGET DFNFLQRLME EWGIYWFFEH QDHKQKLILV DHVGAHKRSF STAYHAIEYL SDEPKAGEEY ITQFQTQETL TSGTWVTNDY DFTKSRADIL AMDSKPRKTS FNDLEIYHWP GDYDQPDIGE HLSRVRIEER GALGSRAVGS GQLRGIVCGA NFELKGFPVD KANREYMIIS SRLTVAEVDQ LSGGEDAFSC ESSFTVQPTT KIYRHPQVTP KPKTNGPQNA IIVGPPGEEI WTDEYGRVKV RFVWDRYGTN SESDSCWLRV SQAWAGNSFG GIYIPRIGQE VIVDCINGDP DRPMVMGSLY NNVTRPPWDL PANATQSGMV SRTVGGGLTN YNGVRFEDKS GLEQYWEQAE RDMSRLTKNN ETQIIGADSV LNVGANRSEV VGANYNQDVL GTSMLAIGAA SMLQVGLARS VVVGGAHSLN VVLANATNVG GANMTNVGGF NGLAVGGAHQ TAVGGAATLA AGGPIAIGAG GELILSGDIV KIVGKSKVII QGGEVHINSD DCCGRKTGNG GGAFGAFASL AGLLPLAGAI ALPLPLPLLP IVVPPVTSPP DPTLPPDPTL PPDPTLPPET TAPPETTAPP ETTAPPETTA PPETTAPPET TAPPETTAPP ETTAPPETTA PPETTAPPET TAPPETTAPP ETTAPPETTA PPETTAPPET TAPPETTAPP ETTAPPETTA PPETTAPPET TAPPETTAPP EPTRTPPGTQ TPPP
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