Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A1855 |
Symbol | lipA |
ID | 5800326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 1922899 |
End bp | 1923864 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641339787 |
Product | lipoyl synthase |
Protein accession | YP_001606342 |
Protein GI | 162420328 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0320] Lipoate synthase |
TIGRFAM ID | [TIGR00510] lipoate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000137205 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAAC CGATTCAGAT GGAACGCGGC GTAAAATACC GTGATGCAGA CAAAATGGCG TTAATCCCGG TAAAAAACGT GGTGACCGAA CGTCAGGAGC TGTTGCGTAA ACCCGAGTGG CTAAAAATCA AGCTTCCGAC TGATTCCAGC CGCATTCAGG GTATCAAAGC TGCAATGCGT AAGAATGGTC TGCATTCGGT TTGTGAAGAG GCCTCCTGCC CTAACCTGTC TGAGTGCTTT AACCACGGTA CGGCAACATT TATGATCCTT GGTGCAATTT GTACCCGCCG TTGCCCATTC TGTGACGTTG CCCATGGTCG CCCAGTCACA CCGGATGCTA ATGAGCCAGA GAAGCTGGCA CAGACGATCC AAGACATGGG TCTGCGCTAT GTTGTTATCA CGTCCGTTGA CCGTGATGAC CTACGTGATG GTGGTGCTCA GCATTTTGCC GATTGTATTT CAGCGATCCG CGCCAAGAAT CCAACCATCA AAATTGAAAC GTTAGTCCCT GATTTCCGTG GTCGTATGGA TCGCGCACTC GATATTCTGA CCGCAACCCC ACCAGATGTA TTTAACCATA ATTTGGAAAA CGTACCACGT GTTTATCGGC AGGTTCGTCC AGGGGCGAAC TACGATTGGT CACTGAAATT ACTTGAGCGC TTCAAAGAAG CACATCCAGA TATCCCAACT AAATCCGGCT TAATGGTCGG CTTGGGCGAA ACCAATGCCG AGATTGTCGA GGTCATGCAT GATTTACGCC GCCACGGGGT CACGATGTTG ACGCTGGGGC AATACTTGCA ACCAAGCCGC CATCATTTAC CCGTACAACG TTATGTCAGC CCGGCCGAGT TTGACGAAAT GAAAGCAGAA GCCATGGCTA TGGGCTTTAC CCATGCAGCC TGTGGCCCAT TTGTTCGCTC TTCTTACCAT GCAGACCTGC AAGCGAAAGG TATGGAAGTG AAGTAA
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Protein sequence | MSKPIQMERG VKYRDADKMA LIPVKNVVTE RQELLRKPEW LKIKLPTDSS RIQGIKAAMR KNGLHSVCEE ASCPNLSECF NHGTATFMIL GAICTRRCPF CDVAHGRPVT PDANEPEKLA QTIQDMGLRY VVITSVDRDD LRDGGAQHFA DCISAIRAKN PTIKIETLVP DFRGRMDRAL DILTATPPDV FNHNLENVPR VYRQVRPGAN YDWSLKLLER FKEAHPDIPT KSGLMVGLGE TNAEIVEVMH DLRRHGVTML TLGQYLQPSR HHLPVQRYVS PAEFDEMKAE AMAMGFTHAA CGPFVRSSYH ADLQAKGMEV K
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