Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A1854 |
Symbol | lipB |
ID | 5800325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 1922008 |
End bp | 1922706 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641339786 |
Product | lipoate-protein ligase B |
Protein accession | YP_001606341 |
Protein GI | 162420857 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0321] Lipoate-protein ligase B |
TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00000629456 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTCGCT TGCAACAACA CAAGATCATT TTACGTCAGC TAGGGTTACA ACCCTATGCA CCCGTATCCC AAGCCATGCA TAACTTTACT GAGTTTCGCA CTGATACCAC ACCAGACGAA ATCTGGTTGG TTGAGCATCA GCACGTCTTT ACTCAGGGTC AGGCTGGAAA AGCTGAACAT GTCCTGATGC CAGGTGATAT TCCGGTTATT CAAAGTGATA GGGGGGGTCA GGTCACCTAC CATGGCCCCG GCCAGCAAGT GATGTATGTC ATGGTTGATC TCAAACGTGC CAAAATCGGT GTACGCCAGC TAGTCACCGT CATTGAGAAT ACGGTGATAG AGACTCTCGC CCATTTCAAT ATTGATTCAC ATGCTCGCCC AGATGCCCCC GGTGTCTATG TTGAACAACA GAAAATATGC TCACTGGGGC TACGCATCCG CCGAGGCTGT TCGTTTCACG GTTTAGCATT GAACATTGCG ATGGATCTGG AACCGTTCCA GCGCATTAAT CCGTGCGGCT ACGCGGGTAT GCAGATGACA CAAGTCAGTG CATTACAACC AGGGGTTACC GTTGCGGATG TGCAGCCTGT ATTGGTTCGC GAATTTACCC GCCAATTAGG TTATCCGACG GCAAAATTGC AGCCGTGGTC ATTATCAGAC TATTTATTAT CAAGCCATTC ATCATCAAGC GTGTTGTAA
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Protein sequence | MPRLQQHKII LRQLGLQPYA PVSQAMHNFT EFRTDTTPDE IWLVEHQHVF TQGQAGKAEH VLMPGDIPVI QSDRGGQVTY HGPGQQVMYV MVDLKRAKIG VRQLVTVIEN TVIETLAHFN IDSHARPDAP GVYVEQQKIC SLGLRIRRGC SFHGLALNIA MDLEPFQRIN PCGYAGMQMT QVSALQPGVT VADVQPVLVR EFTRQLGYPT AKLQPWSLSD YLLSSHSSSS VL
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