Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A1785 |
Symbol | menD |
ID | 5800256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 1848041 |
End bp | 1849744 |
Gene Length | 1704 bp |
Protein Length | 567 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641339719 |
Product | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase |
Protein accession | YP_001606274 |
Protein GI | 162421028 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase |
TIGRFAM ID | [TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.468181 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGACAA GTGTTTTTAA CCGTCGTTGG GCGGCACTGC TACTGGAGGC TTTGACCCGC CACGGTGTGC GTCATATCTG TATTGCCCCA GGGTCTCGCT CTACACCGTT AACGTTAGCG GCTGCCGCTA ATCCGTCGTT GGTTTGCCAT ACCCATTTTG ATGAGCGCGG TCTGGGCCAT CTGGCTCTGG GGCTGGCGAA GGCCTCAACA GAACCGGTGG CGGTCATTGT CACCTCGGGT ACGGCGGTGG CGAATCTTTA TCCTGCGCTA ATCGAAGCGG GGTTAACGGG TGAGCGGCTG ATATTATTGA CCGCTGATCG CCCACCGGAG TTAATCGATT GCGGTGCCAA TCAGGCTATC CGCCAGCAGG GGCTGTTTGC CAGCCATCCA ACCCTAAGTG TTAATCTCCC CAGACCGACG CCCGATATCT CTGCCCGTTG GTTGGTTTCC ACACTCGACA GCGCGATGGC GCAATTGCAA CATGGCGCTT TGCACATTAA TTGTCCCTTT GCTGAACCAC TGTATGGGGG GGATGAGCAA CAGTATGCCG ACTGGTCTGC CTCGCTGGGC GATTGGTGGC AGGATTGTCA CCCATGGCTG CGTCAAACCT GTTACCCGCC CTCTCTTTAT CAACCACCAG CACAGCAAGC TGACTGGTTT TTCTGGCGGC AAAAACGTGG CGTCGTGATT GCCGGACGGA TGGGCGCGCA AGAGGGTAGG CAACTGACCG CATGGGCTGC AATGCTGGGC TGGCCACTGA TTGGCGATGT ATTGTCACAA ACCGGTCAGC CATTGCCTTG TGCTGACTTA TGGCTGGCGC ACCCACGGGC GCAAGAAACC CTCGCTCAAG CACAGATGGT GTTGCAATTT GGCAGCAGTC TGACCAGTAA GCGCCTTTTA CAATGGCAGA CCGCATGTCA GCCACAGGAA TACTGGCTGG TGGATAGCGC CCCAGGCCGC CTTGATCCTG CTAACCATCG TGGCCGACGT ATTATTTGCC CGGTGGGCGA GTGGTTGAGT CGGCACCCCG CGCAGCGGCG TACACCTTGG GCCACGGAAC TGGCGGCATA TTCGGAAAGT GCGCAAGCAC AGGTGATCGA GACGCTGGCC GGCCAATTCA GTGAGGCCGC CGTGGCACAT CAGCTCGCGG AATTATTACC GGATAACGGC CAGCTATTTG TTGGCAACAG TTTGATTGTC CGGTTGATTG ATGCGCTGGG GCAGCTACCC GCAGGCTATC CGGTTTACAG CAATCGGGGG GCCAGCGGTA TCGATGGTTT GCTGTCAACC GCCGCCGGTG TACAGCGCGC GACGGCGAAA CCGACATTAG CTATCGTCGG TGATTTGTCT GCCTTATATG ACCTTAATGC GCTGGCACTT TTGCGCCAGA GCTCGGCACC GATGGTGCTA CTGGTGATCA ATAACAATGG GGGGCAGATT TTCTCTTTAT TGCCAACGCC AGAGGCCGAG CGCCAGCGTT TCTACTGTAT GCCGCAGGAT GTGAACTTCG AACACGCGGC GGTTATGTTC AGCTTAGGTT ATGCTCGCCC TAATAGCTGG CCTCAGCTAC GGGAGCTAGT GCATCAATGC TGGCTACGGG GGGGAACCAC GCTGATTGAA GTCCAGGTGC CACCAAGTCA GGGGGCAGAA ACACTGCAAC AGTTAGTACA ACAGGTGACA TTAATACCGC AGGTGGCCCC ATGA
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Protein sequence | MSTSVFNRRW AALLLEALTR HGVRHICIAP GSRSTPLTLA AAANPSLVCH THFDERGLGH LALGLAKAST EPVAVIVTSG TAVANLYPAL IEAGLTGERL ILLTADRPPE LIDCGANQAI RQQGLFASHP TLSVNLPRPT PDISARWLVS TLDSAMAQLQ HGALHINCPF AEPLYGGDEQ QYADWSASLG DWWQDCHPWL RQTCYPPSLY QPPAQQADWF FWRQKRGVVI AGRMGAQEGR QLTAWAAMLG WPLIGDVLSQ TGQPLPCADL WLAHPRAQET LAQAQMVLQF GSSLTSKRLL QWQTACQPQE YWLVDSAPGR LDPANHRGRR IICPVGEWLS RHPAQRRTPW ATELAAYSES AQAQVIETLA GQFSEAAVAH QLAELLPDNG QLFVGNSLIV RLIDALGQLP AGYPVYSNRG ASGIDGLLST AAGVQRATAK PTLAIVGDLS ALYDLNALAL LRQSSAPMVL LVINNNGGQI FSLLPTPEAE RQRFYCMPQD VNFEHAAVMF SLGYARPNSW PQLRELVHQC WLRGGTTLIE VQVPPSQGAE TLQQLVQQVT LIPQVAP
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