Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A1563 |
Symbol | potF |
ID | 5800032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 1612986 |
End bp | 1614095 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641339512 |
Product | putrescine transporter subunit: periplasmic-binding component of ABC superfamily |
Protein accession | YP_001606071 |
Protein GI | 162421714 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCACCC AACGTAAAAA GTGGTTATCG GGTGTTGCTG CCGGTCTGTT AATGGCCGCG TCCGTCTCAG CATCTGCTGA AGAGAAGATA TTGCACATTT ACAACTGGTC CGATTATATC GCTCCGGATA CGCTGGCTAA TTTCCAAAAG GAAACCGGCA TTAAGGTTGT TTATGATGTG TTTGACTCTA ATGAGGTGTT GGAAGGGAAA TTAATGGCGG GGAGCACAGG GTTTGATTTG GTGGTGCCAT CAGCCAGTTT CCTTGAGCGT CAATTGTCAG CCGGTGTCTT TAAGCCACTG GATAAAAGCA AGTTACCGAA TGAGAAAAAT CTCGACCCCG AGTTACTGGC GCTGGTCAGC AAGCACGATC CCGATAATAA ATATGCCATT CCTTATCTCT GGGCCACGAC CGGTATCGGC TATAACGTCG AGAAAGTGAA GGCAGTGCTA GGAGAAGATG CGCCAGTCAA TAGCTGGGAT TTGGTGCTGA AACCCGAAAA TCTTGAGAAG CTGAAAAGTT GTGGTGTCTC CTTCCTGGAT GCGCCGAGCG AAATTTTCGC CACGGTACTC AACTATTTAG GTAAAGATCC GAACAGTACA CTCACTGCCG ATTACACGGG CTCCGCGACG GATTTATTGC TGAAGTTGCG GCCAAATATC CGCTATTTCC ACTCGTCACA ATACATTAAT GATCTGGCGA ACGGGGATAT CTGTGTCGCT GTGGGTTGGG CCGGCGATAT CATGCAAGCC TCTAATCGTG CCAAAGAAGC GAAGAATGGG GTGAATGTGG CTTACAGCAT TCCGAAGGAA GGCGCCTTAG CGTTCTTTGA TGTGTTTGCG ATGCCAACTG ACGCTAAAAA TCAGGATGAA GCTTACCAGT TCCTTAATTA CCTGATGCGC CCTGATGTGA TTGCGAATAT CAGTAACCAC GTGTTCTACG CGAACGCCAA CCAAGCGGCT ACACCGTTGG TGAACGCAGA GGTTCGTGAT AATCCAGGGA TTTACCCGCC AGCGGATGTA CGTGCCAAAA TGTTTACGCT AAAAGTGCAG GATCCGAAAA TTGACCGGGT CATCACCCGG GCCTGGACAA AAGTTAAAAG CGGTAAATAA
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Protein sequence | MFTQRKKWLS GVAAGLLMAA SVSASAEEKI LHIYNWSDYI APDTLANFQK ETGIKVVYDV FDSNEVLEGK LMAGSTGFDL VVPSASFLER QLSAGVFKPL DKSKLPNEKN LDPELLALVS KHDPDNKYAI PYLWATTGIG YNVEKVKAVL GEDAPVNSWD LVLKPENLEK LKSCGVSFLD APSEIFATVL NYLGKDPNST LTADYTGSAT DLLLKLRPNI RYFHSSQYIN DLANGDICVA VGWAGDIMQA SNRAKEAKNG VNVAYSIPKE GALAFFDVFA MPTDAKNQDE AYQFLNYLMR PDVIANISNH VFYANANQAA TPLVNAEVRD NPGIYPPADV RAKMFTLKVQ DPKIDRVITR AWTKVKSGK
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