Gene YpAngola_A1452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A1452 
Symbol 
ID5799920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp1506180 
End bp1507967 
Gene Length1788 bp 
Protein Length595 aa 
Translation table11 
GC content50% 
IMG OID641339407 
Productmethyl-accepting chemotaxis protein 
Protein accessionYP_001605968 
Protein GI162419208 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.19796 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.220045 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGATT CCATTCGCTC ACGTATTTTG GCAGCCTGTA TTATCATCGT TGCGGGTTCG 
CTCGCCATTA ACACCTTCCT CAACTATTCC GTTGCCAATA AATATAATAA CAGCGCCATC
GATAATACCC TGACGGCACT CACTGTTAGC CACAGTGTCA GCATTGCTGA ATGGGTGGCA
TCCAAAACAC AAATGATTAT GTCGCTCAAA GACAGCGCAT TGACCGCCGA TCCACTCGCA
GCACTAAAGC AAGTGGCTGC AGCAGGCGGC TTTATTAATG TCTATATTGG CTATGCCGAT
AAAACGGCTA TTTTTTCCAA CCCGGATGGC ATTCCTGCCG ATTATGACCC CACCGGACGC
CCGTGGTATC TACAAGCCGT GAATGCAGGC AAGCCAGTGG TGACACCTCC GTATATCGAT
GCGGGGACCC AGCAGTTAGT CGTCACATTT GCATGGTCCA TCGTTCAGGA TGGGGTTCTT
AAAGGCGTGA TCGCTGCCGA TGTCACTATG GGAAGTGTCA TTGCCAATGT AAATGCTATA
CACCCAACCG ATAATAGCTT CGGAATGCTA ATCGGGGCTG ATGGCACAAT CATCGCCCAT
CCTGAGACGC TGCTGACCCT TAAGCCATTG GCCGATATCG CGCCGAACCT GAATTTACAA
ACCCTGCTGA CGGCAACGGT ACCTGTTTCA ACGGATATTA GCGGCAGCAG CAAATTATTG
CTCGCCCAGG CGGTCCCTGG AACCCAGTGG TTTACCGTCG TTGCGCTGGA TAAATCTCAA
GCAACTGCGG GAATACATTC ATTATTAACG ACATCATTAG TAACATTGGT GATAATTATC
TTCATCTCGG CGGGGGTGAT AGCGCTGATC ACCCAACGCG CCCTGACACC ATTAACACAT
ATTCAGCAAG CGATGGATGC TATCAGTTCC GGCTCGGCAG ACCTCACTCA ACGCCTCCCG
ATCGAAGGCC GTGATGAAGT AGCACAGATT GCCCGTTCAT TTAATCAGTT TGCGGATAAG
CTCAGTCTGG TTATGGCTCA AATCCGTGGT ACCAGCGAGT CTGTCCGGGT AGCAGCGAAT
GAAATCGCAG CAGGCAACCA AGACTTATCG GGTAGAACAG AATCAGCCGC CGCCAGTTTG
CAGCAAACCT CAGCAGCGCT GGAACAAATT TCGGCAACCG TCGCTCAATC AGCCAGTGCC
GCACGGCAAG CTAACAACGC GGTATTTTCT GCCTCTGAGG ATGCTTCTCG CGGTGGCGAC
GTTATCACTA AAGTCATCAC AACGATGGAG TCAATTGAAA AGGCCTCGGG AAAAATTGGC
GATATCACTA GCGTCATTGA TGGCATTGCT TTCCAAACAA ATATTCTGGC ACTGAATGCT
GCCGTCGAGG CCGCTCGAGC AGGAGAACAA GGACGAGGTT TTGCCGTGGT TGCAGGCGAA
GTCCGTATAC TGGCACAACG CAGTGCACAA GCGGCTAAAG AGATAAAAGC CCTGATCGAA
TCGACGGTCA GCAGTGTGGC ATCCGGCTCC AGCCAAGTGC GCCAAGCCAG TAATGCCATG
ACCGATATTG TCAGTAGTGT CTCTGATGTC ACGACCATTA TGTCGGAGAT CACCAATGCC
GCTGATGAAC AAATGCGTGG TATTCACGAA ATAAATAGTG CAGTAGCGCA ATTAGATACA
ATGGTGCAAC AGAATGCCGC ACTGGTGCAG GAGTCAACGG CCGCTTCAGC CGCCTTACAA
GCTCAGGCCG CTGATTTAAC TGATACCGTT AATCAATTTA AGATCTAA
 
Protein sequence
MLDSIRSRIL AACIIIVAGS LAINTFLNYS VANKYNNSAI DNTLTALTVS HSVSIAEWVA 
SKTQMIMSLK DSALTADPLA ALKQVAAAGG FINVYIGYAD KTAIFSNPDG IPADYDPTGR
PWYLQAVNAG KPVVTPPYID AGTQQLVVTF AWSIVQDGVL KGVIAADVTM GSVIANVNAI
HPTDNSFGML IGADGTIIAH PETLLTLKPL ADIAPNLNLQ TLLTATVPVS TDISGSSKLL
LAQAVPGTQW FTVVALDKSQ ATAGIHSLLT TSLVTLVIII FISAGVIALI TQRALTPLTH
IQQAMDAISS GSADLTQRLP IEGRDEVAQI ARSFNQFADK LSLVMAQIRG TSESVRVAAN
EIAAGNQDLS GRTESAAASL QQTSAALEQI SATVAQSASA ARQANNAVFS ASEDASRGGD
VITKVITTME SIEKASGKIG DITSVIDGIA FQTNILALNA AVEAARAGEQ GRGFAVVAGE
VRILAQRSAQ AAKEIKALIE STVSSVASGS SQVRQASNAM TDIVSSVSDV TTIMSEITNA
ADEQMRGIHE INSAVAQLDT MVQQNAALVQ ESTAASAALQ AQAADLTDTV NQFKI