Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A1164 |
Symbol | treC |
ID | 5799629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 1201407 |
End bp | 1203074 |
Gene Length | 1668 bp |
Protein Length | 555 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641339138 |
Product | trehalose-6-phosphate hydrolase |
Protein accession | YP_001605708 |
Protein GI | 162421393 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | [TIGR02403] alpha,alpha-phosphotrehalase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.679252 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAATC CAATCCCTTG GTGGCAACAT GGTGTCATCT ATCAGATTTA CCCGAAGAGC TTTCAGGACA GTACCGGTAA TGGCTATGGT GACCTGGCAG GCGTTGCGCA GCGGCTGGAT TATCTGCAAA AGCTGGGCGT TGATGCCATT TGGCTGACAC CGGTGTATGT CTCGCCACAA GTGGATAACG GTTATGACGT GGCGGATTAC TGCGCCATTG ACCCCGCTTA TGGCACATTG GATGACTTTA AACGTTTGGT CGCGGGTGCT CATCAGCGAG GCATACGCAT CATCATGGAT ATGGTGTTCA ATCACACCTC CACAGAACAT GCCTGGTTTA AAGCTTCGCA GGATCGTAAT AGCCCTTATC GGCAATTTTA TATTTGGCGT GACGGTGACG GTGGAGACGG CAGTTTACCG AATAACTGGC GCTCGAAATT CGGTGGTCAC GCATGGCAGT GGCACGCGGC CAGCGGCCAG TATTATCTGC ATTTGTTTGC CCCAGAGCAG GCTGATCTGA ATTGGGAACA CCAACCGGTA CGCGATGAGC TCAAAAAGGT GTGTGAATTT TGGGCCGATC TGGGGGTTGA TGGTCTGCGT TTGGATGTCA TCAATCTGGT GTCCAAACAG CAGGATTTCC CTAATGATCT GGACGGCGAT GGCCGCCGTT TTTATACCGA TGGCCCACGC ATTCATGAGT TTTTGCAGGA ACTGAGCCGC GATGTGTTCC AGCCACGCCG CCTGATGACG GTAGGCGAGA TGTCATCCAC CCGTCTCGAG CATTGTCAGC GATATGCGGC ATTAGGCGGT GATGAGTTAT CCATGACCTT TAATTTCCAT CACCTGAAAG TGGATTATCT TAACGGTGAA AAGTGGTCAT TGATGCCGCC GAATCGGGTG GAGTTGAAAC ACATTTTTAA TCAGTGGCAG CAAGGGATGC ACAACCGAGC ATGGAACGCA CTATTTTGGT GTAATCACGA TCAACCACGC ATTGTCTCGC GTTTTGGTCA TGAAGGCGCA CTACGTTTGC CAGCGGCAAA GATGCTGGCG ATGGTACTGC ACGGTATGCA GGGCACGCCT TATATTTATC AGGGGGAAGA AATTGGCATG ACGAACCCCA ATTTCACTGA TATCACTCAA TACCGTGATG TTGAAAGCCT GAATATGTTT GCCGAACTGA GTGTGGCAGG CCGCGAACCC GATGAGTTAT TGGCGATTCT GGCAGCTAAA TCCCGTGATA ATAGCCGTAC CCCCATGCAA TGGGATAGCA GCGATAATGC GGGTTTCAGC CAAGGCACTC CCTGGATTGC CCCTTGCAGC AATTATCATG AGATTAACGT TAATGCCGCA TTGGCCGACG CTGACTCGGT GTTTTATGCC TATCAATACC TGATAGCCCT GCGTAAACAA TACGATATTT TCACTTTCGG TGATTATCAG GATCTTTGCC CACAGCACCC TGATTTATGG TGCTATTTGC GCAGTTGGCA AGGGAAGCAA CTGTTGGTAG TCGCTAACCT GAGTGAAGAG CCCCAGCGAT GGCAACCCGA GGGCCTCACG CTGGACGGTA ATTGGCAATT ATTGATGAGC AGCTACGACC AAAGCGCCTT CCAACCGCAA GATATGATAT TACGCGGATA TGAGGGGATT TATTGGGTAT GTGAGTAA
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Protein sequence | MNNPIPWWQH GVIYQIYPKS FQDSTGNGYG DLAGVAQRLD YLQKLGVDAI WLTPVYVSPQ VDNGYDVADY CAIDPAYGTL DDFKRLVAGA HQRGIRIIMD MVFNHTSTEH AWFKASQDRN SPYRQFYIWR DGDGGDGSLP NNWRSKFGGH AWQWHAASGQ YYLHLFAPEQ ADLNWEHQPV RDELKKVCEF WADLGVDGLR LDVINLVSKQ QDFPNDLDGD GRRFYTDGPR IHEFLQELSR DVFQPRRLMT VGEMSSTRLE HCQRYAALGG DELSMTFNFH HLKVDYLNGE KWSLMPPNRV ELKHIFNQWQ QGMHNRAWNA LFWCNHDQPR IVSRFGHEGA LRLPAAKMLA MVLHGMQGTP YIYQGEEIGM TNPNFTDITQ YRDVESLNMF AELSVAGREP DELLAILAAK SRDNSRTPMQ WDSSDNAGFS QGTPWIAPCS NYHEINVNAA LADADSVFYA YQYLIALRKQ YDIFTFGDYQ DLCPQHPDLW CYLRSWQGKQ LLVVANLSEE PQRWQPEGLT LDGNWQLLMS SYDQSAFQPQ DMILRGYEGI YWVCE
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