Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A1139 |
Symbol | degS |
ID | 5799604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 1180020 |
End bp | 1181108 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641339115 |
Product | serine endoprotease |
Protein accession | YP_001605685 |
Protein GI | 162419500 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | [TIGR02038] periplasmic serine pepetdase DegS |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.46983 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCTTA AGCTATTGCG TTCTATTATT TTGGGGCTAA TTGTTGCCGG TATTCTGCTG GTTGCCCTAC CCATGCTCCG CAGCCCAGGT TATTTATTCT CTGGAAAAAG CAATAACGTA AATGAAGAGG TTCCTACCAG TTATAACCAA GCAGTACGTC GTGCCGCACC GGCGGTGGTC AATGTCTATA ACCGGAGCCT GAGCGCTACA CAGCAGGGGT TAGCCATCCG CACGCTGGGC TCGGGTGTGA TCATGAGCGA TAAGGGCTAT ATCCTTACCA ATAAACACGT TATCAATGAT GCAGAACAGA TCATTGTCGC CATGCAAAAT GGCCGTATCT CAGAAGCTTT ATTGGTCGGT TCAGATAATC TGACAGATTT AGCCGTCCTA AAGATTGACG CAACAAACCT GCCGGTGATC CCCATTAATA TTAACCGCAC ACCACATATT GGTGACGTCG TGTTGGCAAT TGGTAACCCT TATAACCTTG GGCAGACAGT AACGCAGGGG ATTATCAGTG CAACCGGGCG TATTGGTTTA AGCTCTTCCG GGCGGCAAAA TTTCCTGCAA ACAGATGCAT CAATTAATCA GGGTAATTCC GGCGGTGCGC TGGTCAACAC CCTTGGCGAG CTAATGGGGA TCAACACGCT CTCATTTGAT AAAAGCAATA ATGGCGAAAC ACCGGAAGGC ATCGGCTTTG CGATCCCAAC AGCACTGGCA ACGAAAGTGA TGGAAAAACT GATCCGTGAT GGGCGGGTGA TCCGTGGTTA TATCGGTATT ACCGGCGAGG AGTACCCACC GTTTAATGCT AACGATAATG GCTCAGATCG GGTACACGGT ATTAAGGTCA AAAAAGTTTC ACCAGACGGC CCAGCGGCCC AGGCAGGAAT ACACGTTGGC GATATCATTC TTAACGTGAA TAATAAACCG GCAACCTCCG TGATCGAAAC TATGGATCAG GTCGCAGAAG TCCGCCCTGG TACGACCATT CCTGTTTTAC TATTACGTAA TGGTCAGCAG ATAGCGGTTC AAATCACCAT CACTGAACTC GATCAGAATG AGATGCTGAC CACCCAAGCA GCAGATTAA
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Protein sequence | MFLKLLRSII LGLIVAGILL VALPMLRSPG YLFSGKSNNV NEEVPTSYNQ AVRRAAPAVV NVYNRSLSAT QQGLAIRTLG SGVIMSDKGY ILTNKHVIND AEQIIVAMQN GRISEALLVG SDNLTDLAVL KIDATNLPVI PININRTPHI GDVVLAIGNP YNLGQTVTQG IISATGRIGL SSSGRQNFLQ TDASINQGNS GGALVNTLGE LMGINTLSFD KSNNGETPEG IGFAIPTALA TKVMEKLIRD GRVIRGYIGI TGEEYPPFNA NDNGSDRVHG IKVKKVSPDG PAAQAGIHVG DIILNVNNKP ATSVIETMDQ VAEVRPGTTI PVLLLRNGQQ IAVQITITEL DQNEMLTTQA AD
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