| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A1002 |
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| Symbol | ligT |
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| ID | 5799465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | + |
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| Start bp | 1029033 |
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| End bp | 1029608 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641338991 |
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| Product | 2'-5' RNA ligase |
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| Protein accession | YP_001605563 |
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| Protein GI | 162421733 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1514] 2'-5' RNA ligase |
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| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.018778 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 86 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAAATA CCGTTGACGA ATTAAAACGT GTCCGCCGCC TATTCTTTGC CCTGACACTG
CCGGATGCCA TGCAACAAGA GATTGTGCAA TGGCGAGCTG GTCATTTCTC GCCAGAGGCG
GGTCGCCCTG TCGCGGCGGC GAATCTGCAC CTGACACTGG CGTTCCTTGG TGAAGTCAGT
GCGACAAAAT CCCAGGTGTT ACAGCAGCAA GCCGGGCGTA TCCAACAAGC AGGTTTCAGC
GTGACATTAG ATGATATCGG CCATTGGCCC GGTTCCGGCG TGATTTGGCT GGGATGTAAG
AACCCCCCTC GTGGCCTGTT GCAATTGGCG CAGTTGCTGC GCTCCCAGGC AGCACGTAGT
GGCTGTTATC AAACGCCGCT GCCGTTTCAT CCCCATGTTA CTCTGTTGCG TAACGCAACC
CGCCCAGTGG CATTACCTGC CAAGAGCGGC AATGAGACCT TCCAGGCGGA CCATTTCTCG
CTGTATGAAT CGGTCTTCGC GCGGGGCCGC ACCCGCTATA ACATCGTACA AAGCTGGCCG
CTGGCTGGCA GTGAAAGGAA ACCAGATGCC TGCTAA
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| Protein sequence | MTNTVDELKR VRRLFFALTL PDAMQQEIVQ WRAGHFSPEA GRPVAAANLH LTLAFLGEVS
ATKSQVLQQQ AGRIQQAGFS VTLDDIGHWP GSGVIWLGCK NPPRGLLQLA QLLRSQAARS
GCYQTPLPFH PHVTLLRNAT RPVALPAKSG NETFQADHFS LYESVFARGR TRYNIVQSWP
LAGSERKPDA C
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