Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A0880 |
Symbol | trmD |
ID | 5799342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 904824 |
End bp | 905564 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641338875 |
Product | tRNA (guanine-N(1)-)-methyltransferase |
Protein accession | YP_001605452 |
Protein GI | 162418418 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.419862 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGATCG GTGTTATTAG CCTGTTTCCT GAGATGTTCC GCGCAATAAC CGATTACGGG GTAACTGGCC GGGCAGTAAA AAATGGCCTG CTGAGCGTGC AGTGTTGGAG TCCTCGTGAC TTCACCTACG ATCGGCATCG TACCGTGGAT GACCGCCCAT ATGGCGGAGG CCCGGGAATG TTGATGATGG TGCAACCGTT AAGGGAAGCC ATTCATGCAG CAAAAGCAGC GGCAGGCGAG GGAGCAAAGG TGATTTATCT GTCACCTCAA GGGCGCAAAC TGGACCAACA GGGTGTTTGC GAACTGGCGA TGAATCAGAA AATGATTCTG GTTTGTGGCC GGTACGAAGG AGTTGATGAG CGCGTAATCA AAACAGAAAT TGATGAAGAA TGGTCAATTG GCGATTACGT TCTCAGCGGT GGCGAGCTGC CAGCAATGAC ATTGATTGAT TCAGTCTCCC GTTTTATTCC GGGCGTACTG GGGCATCATG CCTCAGCGGA GGAAGATTCC TTTGTTGATG GGTTGCTGGA TTGCCCACAC TACACTCGTC CTGAGGTGTT GGAAGGGATG GAGGTACCGC CAGTATTACT GTCAGGTAAC CATGCCGAGA TTCGTCGCTG GCGCTTAAAG CAGTCGCTGG GCCGTACCTG GCTTAGAAGA CCTGAACTTC TGGAAAGCCT AGCTCTGACT GACGAGCAAA TGGTGTTGCT GGCTGAGTTC CAACGGGAAC ATAAGCCCTG A
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Protein sequence | MWIGVISLFP EMFRAITDYG VTGRAVKNGL LSVQCWSPRD FTYDRHRTVD DRPYGGGPGM LMMVQPLREA IHAAKAAAGE GAKVIYLSPQ GRKLDQQGVC ELAMNQKMIL VCGRYEGVDE RVIKTEIDEE WSIGDYVLSG GELPAMTLID SVSRFIPGVL GHHASAEEDS FVDGLLDCPH YTRPEVLEGM EVPPVLLSGN HAEIRRWRLK QSLGRTWLRR PELLESLALT DEQMVLLAEF QREHKP
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