Gene YpAngola_A0843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0843 
Symbol 
ID5799305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp866623 
End bp867777 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content42% 
IMG OID641338840 
Productdiguanylate cyclase 
Protein accessionYP_001605417 
Protein GI162419032 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGCC ACTCCTACGA TCAGTTTTTG AAAAGCAAGC ATCGACTCTC TTTACTGCTT 
TTCCTATTTC TTAATGCATC ATCAGCTATT TTCAGTATGC TATCATCGTC GCCCAAGACA
CCCGCGGTAA CGTTCCCTGT GGTGATGATT GCGGTTATAA GCTTGAGCGC GGCGGCTTAT
CTAATTTTTA TTTCAAAGAA CGACACGGGC AGAAATAACT ATGTTGATAA AAATAACTAT
GTTGATAAAA GTAACCATGT TGACAAAAAT AACTATGCGA ATAAATTGAA TTTATTTTCA
ATCCTCATCG GTCTACTTTG GGCATGGCAA ATCATTCTTA AATATGAATA TCTAGAGACT
AACGAAGATA ATTACTTATT ACTCAGTCTG TTTACGATCT TTTTTATCAG TACCATTGCT
TTGTCTGATA ATTTTCTCGC GTTTTGCCTG CATACGGCAC CTTCGGCAAT AACCGTCATC
TTACTGGATG ATTTTCATAA TATTTTCCGC ATTATATTTA CCATCATGTT ACCGCTGATT
GGTTTTTCTT TGCATCACTT GATGTTGCGT CGCACTGATA ATTTCACCCG TAAGCTGGTT
GATCACCTTT CCAACGAAAG AGAAAAATTC AGTGATTTAA GCATGATAGA CCCTCTGACC
AGTTTGTATA ATCGCCGTGG GCTGGAGAGC AAGCTTGAAA CGTTGTTATC TCAGTCGCCG
GGAAATCATT ATGTCCTGCT GCTCGATATC GATCACTTTA AAGCCTATAA CGACAACTAT
GGCCACACAA TGGGCGATCA GGCTCTGGTA CGGATTTCGG CGGCCATTCG CGATGCTGTG
CGTTCAAGAG ATATCGTGGT GCGTTATGGT GGTGAAGAGT TTCTCGTACT CCTAACACAT
GTCAGTGAAG AGTACGCCAG CCAATTGGCA GAGCGTGTAC GTCAGCGTGT TTTAGGCCTG
GATATTCCAC ATGTCTTTAA TCATAAGGTC TCTACGACGG TCACCTTAAG TGCGGGTATT
TCCCCCCTGC AAGCCTATGA CTTGGCCGCG TCATTGAAAG CCGCGGATGA AGCGCTCTAC
CGGGCCAAGA GAAATGGCCG CAATAACATC GAATTTGCTA AAGATGAATT ATCAAATGTA
CAGTCTTCCC CTTGA
 
Protein sequence
MNSHSYDQFL KSKHRLSLLL FLFLNASSAI FSMLSSSPKT PAVTFPVVMI AVISLSAAAY 
LIFISKNDTG RNNYVDKNNY VDKSNHVDKN NYANKLNLFS ILIGLLWAWQ IILKYEYLET
NEDNYLLLSL FTIFFISTIA LSDNFLAFCL HTAPSAITVI LLDDFHNIFR IIFTIMLPLI
GFSLHHLMLR RTDNFTRKLV DHLSNEREKF SDLSMIDPLT SLYNRRGLES KLETLLSQSP
GNHYVLLLDI DHFKAYNDNY GHTMGDQALV RISAAIRDAV RSRDIVVRYG GEEFLVLLTH
VSEEYASQLA ERVRQRVLGL DIPHVFNHKV STTVTLSAGI SPLQAYDLAA SLKAADEALY
RAKRNGRNNI EFAKDELSNV QSSP