Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A0817 |
Symbol | |
ID | 5799279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 835404 |
End bp | 837323 |
Gene Length | 1920 bp |
Protein Length | 639 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641338814 |
Product | lytic murein transglycosylase |
Protein accession | YP_001605392 |
Protein GI | 162421171 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTAAGT GGCGATATCT GGCGATTGGC GTGTGTCTGA TGACGACTTC AGGAGTGACA TTCGCCGATT CTCTTGATGC TCAGCGGCAG CGCTATCAGC AAGTTAAATT GGCTTGGGAC AGCAATCAGA TGGATACCGT GGCACAACTG ATGCCAACGT TACGTGATTA TCCTCTGTAC CCTTATTTGG AATACCGTCA GTTGACGCAA GATTTAAGCC AGGTGAGTAC GGCGCAAGTG AAGGATTTTC TGAACCGTCA CCCCACATTA CCACCGGCGA AATCACTGCC ATCTCGTTTT GTGAATGAAT TGGCTCGCCG CGAAGATTGG CGCGGGTTGT TAACGTTCAG CCCGACAGCG CCTAAACCGG TTGCCGCCCG TTGTAACTAT TACTATGCCA AATGGGCCAC TGGTGAGCAG TCTGTCGCTT GGGAAGGGGC CAGTGAAATC TGGCTCAATG GCCAGTCATT ACCGGGCAGT TGCGATAAAT TATTCAGTGT CTGGCAACAA GCCGGGCACC AGACACCATT GGCAACACTG GCGCGTATGA AGCTCGCGCT TAAAGAGGGT AACGCCAGCC TGGTGAGTTA CTTACTCAAA CAACTGCCCG CAGATTACCA AACCATGGGC ACTGCACTGG CAAAATTGCA AAGTGATCCC AGTAGTGTAG AAAGCTTTGC CCGCACCGTC GGGCCGACCG ATTTTACCCG TTCAGCGACA ACAATTGCTT TCACCCGTTT GGCTCGACAG GATGTGGAAA ATGCGCGATT GATGATCCCA TCATTAGTAC GGTTACAAAA AATGAGTGAC AGCGAGAAAC TTGAGCTGGA AGAGGCCGTC GCCTGGCGTT TGATGGGTAA TGATGCGATT TACGAACAAG CTAAATGGCG GGATCAAGTT GCGTTACGCA GCCACTCAAC CTCGCTACTG GAGCGTCGTA TCCGTATGTC ATTAGGCAGT GGTGACCGGC AGGGGCTGGC AACCTGGCTG GCTCGTCTCC CGGCGGAGGC GCAAGATAAA GATGAGTGGC GTTATTGGCG TGCATCGTTG TTGTTGGAAC AAGGAAAAAA AGCGGAAGGT GAGGCAATAC TGCGTAGCCT GACGAAAGAA CGGGGTTTCT ATCCGATGGT GGCCGCCCAA AAACTGAATA TTCCTTACCC GATTAAGGTT CAGGTGGCGG CCAAGCCAGA TGTGTCGCTG GCGCAACGGC CTGAAATCGC CCGGGTTCGC GAGTTAATGT ATTGGAATAT GGATAACCAA GCGCGCGCTG AATGGAGCTA TTTGGTGGCC AGTCGCAGTA AAGCTGAGCA AGAGGCTCTG GCACGCTATG CCTTTGACCA AAAATGGGCT GATCTGAGTG TGCAAGCCAC TATTGTTGCC AAGCTTTGGG ATCATCTGGA GGAGCGCTTC CCAATGGCAT GGACCAAAGA GTTCCGCCAG TTTACGGAGG ATAAGGGGAT CACGCCGAGT TATGCGATGG CGATTGCACG TCAGGAAAGC GCCTGGAATC CAAAAGCACA ATCACCGGTA GGCGCAACGG GATTAATGCA GGTGATGCCG CGTACTGCAG AACATACCGT AAAACGGAAT AATATCGCTG GGTATCTGAA TAGCAGCCAA CTCCTTGATC CGGTGACTAA CATTGAGATA GGAACCTACT ATCTGGAAGA GGTTTATCAG CAATTCGGGC GTAACCGTAT TTTATCCAGT GCGGCTTATA ATGCAGGTCC GTCACGGGTG AATACTTGGT TGGGTAACAG TGGTGGGCAG GTGGATGCGG TGGCTTTCAT TGAAAGTATC CCATTCTCTG AAACGCGCGG CTACGTGAAG AATGTGTTGG CTTATGACGC TTTCTATCGT CACTTTATGA ATCGCCCCGC AAAAGTGCTG AGTGACGCCG AGTGGCAGAG GCGTTATTGA
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Protein sequence | MGKWRYLAIG VCLMTTSGVT FADSLDAQRQ RYQQVKLAWD SNQMDTVAQL MPTLRDYPLY PYLEYRQLTQ DLSQVSTAQV KDFLNRHPTL PPAKSLPSRF VNELARREDW RGLLTFSPTA PKPVAARCNY YYAKWATGEQ SVAWEGASEI WLNGQSLPGS CDKLFSVWQQ AGHQTPLATL ARMKLALKEG NASLVSYLLK QLPADYQTMG TALAKLQSDP SSVESFARTV GPTDFTRSAT TIAFTRLARQ DVENARLMIP SLVRLQKMSD SEKLELEEAV AWRLMGNDAI YEQAKWRDQV ALRSHSTSLL ERRIRMSLGS GDRQGLATWL ARLPAEAQDK DEWRYWRASL LLEQGKKAEG EAILRSLTKE RGFYPMVAAQ KLNIPYPIKV QVAAKPDVSL AQRPEIARVR ELMYWNMDNQ ARAEWSYLVA SRSKAEQEAL ARYAFDQKWA DLSVQATIVA KLWDHLEERF PMAWTKEFRQ FTEDKGITPS YAMAIARQES AWNPKAQSPV GATGLMQVMP RTAEHTVKRN NIAGYLNSSQ LLDPVTNIEI GTYYLEEVYQ QFGRNRILSS AAYNAGPSRV NTWLGNSGGQ VDAVAFIESI PFSETRGYVK NVLAYDAFYR HFMNRPAKVL SDAEWQRRY
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