Gene YpAngola_A0762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0762 
Symbol 
ID5799224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp776821 
End bp778323 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content48% 
IMG OID641338759 
Producthypothetical protein 
Protein accessionYP_001605337 
Protein GI162420443 
COG category[S] Function unknown 
COG ID[COG3517] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03355] type VI secretion protein, EvpB/VC_A0108 family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.277703 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.125026 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAAAG CCCAACTCAA TGACACGCCA GACATCAACG TCGATCTGGC TGAAAACGAG 
TTAGATGACA TTTTAAAACG TTCTTTTCGC CCTCGAACTG ACGAAGCTTC CGCCACAGTG
CGCCGTGCCA TAGGCACGCT TGCTGCGTAT GCCAATAAAG GCCAAGTGAA AGTCAATCGT
GATGTCGTAC TGACCATTGA GTCTTTAGTC GCTGAAATTG ACGAAAAACT TTCCGATCAA
ATGAACCTTA TTCTGCACCA TAAAGAGTTC CAAAAGCTGG AATCAGCTTG GCGCGGGCTT
AGCTATCTTG TTGATAATAC AGATGCTAAT GAAACTTTAA AAATACGGGT ACTGAACATT
AGCCAAGATG AACTGGGGAA AACGCTTCGC CGTTATCGTG GCTCTGCATG GGATCAAAGT
CCGATATTTA AACAGGTCTA TGAACATGAA TATGGGCAGT TTGGTGGGGA ACCTTTTGGT
TGCATGATCG GTGATTATGA ATTCGATCAC AGTCCACAGA GTGTGGCTCT GCTGACCGAG
TTAGCCAAGG TGGCCGCCGC CGCTCACTGT CCTTTCATTA CCTCTTCTTC CCCAAGCATC
ATGCAGATGA ATAACTGGAG GGAGCTGGGT AACCCAAGGG ATATCGGCAA AATCTTTACC
ACACCTGAAT ATGCGCCATG GAGACGTTTA CGTGAGAGTA ATGACTCCCG CTATCTGGTA
CTGACTCTGC CACGTTTTCT TTCGCGTCTG CCGTATGGTG CCAAAAATCA TCCTATTGAT
GATTTTGCTT TTGAAGAAGT GGTTAGCCCT CATGCCAGTG AGGATTTCAC CTGGGCGAAT
GCGGCCTATG CCATGGGCGT CAATATTAAC CGGGCCTTCA ATGAATATGG TTGGTGTTCA
AGGATCCGCG GTATTGAGTC GGGGGGGTCC GTAGAAGAAC TTCCGGCCTA TGCTTTTCCT
TCTGACGAAG GCGGATATGA ACTCACTTGT CCGACAGAAT TGGCAATTTC GGACCGTCGT
GAGAACGAGC TATCCAATGC TGGGTTTTTA CCGCTGGTCT ACCGTAAGAA CTCAGACTTT
GCCGCCTTTA TCGGGTCGTG CACCCTGCAT GCACCGGCAA ACTATGATGA CCCCGATGCG
ACGGCGAACG CCAGATTATC GGCCCGTTTA CCTTACATTT TTGCCACCTG TCGTTTCGCC
CATTACCTCA AATGTATTGT GCGCGACAAA ATTGGTTCGT TCCGCTCGCG GGATGACATG
CAACTTTGGC TTAACGACTG GGTGATGAAC TACGTCGATG GTGACCCCTC CATTTCAACA
GAAGCCACTA AAGCTAAACG CCCGCTGGCC GCTGCGGAAG TTCAAGTTGA AGACGTAGAG
GATGATCCTG GTTTTTACCG CGCTCACTTC TATTTACGCC CTCACTACCA ACTTGAAGGT
ATGACGGTTT CTCTGCGGCT GGTTTCTAAA CTTCCATCCA ACAAGGAAAG CGAAAAGAAA
TAA
 
Protein sequence
MQKAQLNDTP DINVDLAENE LDDILKRSFR PRTDEASATV RRAIGTLAAY ANKGQVKVNR 
DVVLTIESLV AEIDEKLSDQ MNLILHHKEF QKLESAWRGL SYLVDNTDAN ETLKIRVLNI
SQDELGKTLR RYRGSAWDQS PIFKQVYEHE YGQFGGEPFG CMIGDYEFDH SPQSVALLTE
LAKVAAAAHC PFITSSSPSI MQMNNWRELG NPRDIGKIFT TPEYAPWRRL RESNDSRYLV
LTLPRFLSRL PYGAKNHPID DFAFEEVVSP HASEDFTWAN AAYAMGVNIN RAFNEYGWCS
RIRGIESGGS VEELPAYAFP SDEGGYELTC PTELAISDRR ENELSNAGFL PLVYRKNSDF
AAFIGSCTLH APANYDDPDA TANARLSARL PYIFATCRFA HYLKCIVRDK IGSFRSRDDM
QLWLNDWVMN YVDGDPSIST EATKAKRPLA AAEVQVEDVE DDPGFYRAHF YLRPHYQLEG
MTVSLRLVSK LPSNKESEKK