Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A0621 |
Symbol | rimN |
ID | 5799084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 628941 |
End bp | 629513 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641338624 |
Product | putative ribosome maturation factor |
Protein accession | YP_001605212 |
Protein GI | 162421283 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0009] Putative translation factor (SUA5) |
TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000000135377 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.0218454 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCAAC AAGAAAATAA TTTTGTGCTG GCGGATATAG TGCGGGCATT GCGGCAAGAA GAGGTTATCG CTTATCCGAC AGAAGCAGTT TTTGGTTTAG GATGCGATCC CGATAGTGAA AAAGCGGTTA ATACTTTGCT AGCGTTAAAA CAGCGGCCAT GGCAGAAAGG TTTGATCTTG GTTGCCGCTA ATTATGCTCA GTTAGAGCCT TATATTAATG ATTCAATGCT TAATGAAATA CAACGAGAAA CCCTCTTTTC CACTTGGCCG GGGCCGATAA CGTGGGTGAT ACCTGCCCGA GTAGAAACAC CGCAATGGCT AACAGGCTGT TTTGACTCAT TGGCGGTGAG AGTAAGCAAT CACCCACTTG TACAGCAGCT TTGTGCGGAA TATGGCAAGC CGTTAGTGTC AACTAGCGCT AATTTAAGTG GGCATGAGCC GTGCCGCACG GAAGAAGAAG TCAGAATACA GTTTGGCCCT TCATTACCGG TGTTATCCGG TCACGTTGGT GGCCGTTTGA ATCCATCTGA AATCAGAGAT GCCTTAACGG GTAAGCGGTT TCGCCAAGGG TAG
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Protein sequence | MNQQENNFVL ADIVRALRQE EVIAYPTEAV FGLGCDPDSE KAVNTLLALK QRPWQKGLIL VAANYAQLEP YINDSMLNEI QRETLFSTWP GPITWVIPAR VETPQWLTGC FDSLAVRVSN HPLVQQLCAE YGKPLVSTSA NLSGHEPCRT EEEVRIQFGP SLPVLSGHVG GRLNPSEIRD ALTGKRFRQG
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