Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A0598 |
Symbol | rplF |
ID | 5799061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 611974 |
End bp | 612507 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641338601 |
Product | 50S ribosomal protein L6 |
Protein accession | YP_001605189 |
Protein GI | 162418250 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0097] Ribosomal protein L6P/L9E |
TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000013887 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.735029 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCGTG TTGCAAAAGC ACCCGTCGTC ATTCCTGCCG GCGTAGAGGT AAAACTCAAC GGTCAGGTTA TTTCGATTAA GGGTAAGAAC GGCGAGCTGA CTCGTACCGT CCATAGTGCT GTTGAAGTTA AGCAAGAAGA AAATACATTG ACTTTCGCTC CACGCGAAGG CGCTGTAGAC GGTTGGGCCC AAGCGGGTAC CACTCGTGCA CTACTTAACT CAATGGTCAT TGGTGTTACC GAAGGCTTCA CTAAGAAGCT TCAACTGGTA GGCGTAGGCT ACCGTGCCGC AGTTAAAGGC AACGTGGTGA ATTTAGCTTT AGGCTTCTCT CACCCAGTTG ACCATGAATT GCCGGCTGGC ATCACTGCCG AGTGCCCGAC CCAAACTGAA ATCGTGCTGA AAGGCGCTGA TAAGCAGGTG ATTGGTCAGG TTGCAGCAGA TTTGCGTGCC TACCGTCGTC CTGAGCCTTA TAAAGGCAAG GGTGTCCGTT ACGCCGACGA AGTCGTGCGT ACCAAAGAGG CTAAGAAGAA GTAA
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Protein sequence | MSRVAKAPVV IPAGVEVKLN GQVISIKGKN GELTRTVHSA VEVKQEENTL TFAPREGAVD GWAQAGTTRA LLNSMVIGVT EGFTKKLQLV GVGYRAAVKG NVVNLALGFS HPVDHELPAG ITAECPTQTE IVLKGADKQV IGQVAADLRA YRRPEPYKGK GVRYADEVVR TKEAKKK
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