Gene YpAngola_A0543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0543 
SymbolxerC 
ID5799006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp563888 
End bp564799 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content54% 
IMG OID641338548 
Productsite-specific tyrosine recombinase XerC 
Protein accessionYP_001605136 
Protein GI162418493 
COG category[L] Replication, recombination and repair 
COG ID[COG4973] Site-specific recombinase XerC 
TIGRFAM ID[TIGR02224] tyrosine recombinase XerC 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGT TCAGTGCTTC ACTGGCTCCG CAGGTAGAGG CTTTTCTCCG TTATCTCAGT 
ATTGAGCGTC AGCTTAGTCC ACTGACCGTC ACCAGTTATC GCCGTCAGTT GTCTGCGCTA
ATGGAAATAG GCGAACAGAT GGGCTTGGCT CACTGGCAGA CGCTGGATGC TGCTCAGGTC
CGTTCGTTGG TCTCCCGCAG CAAACGTGCG GGTTTACATG CTTCAAGCCT GGCATTACGG
CTCTCCGCAT TACGCAGTTT TCTCAACTGG TTGGTCAGCC AGGGCGTGCT GCCAGCCAAC
CCCGCTAAAG GGGTCAGTAC GCCACGCTCG GGCCGCCACC TGCCAAAAAA TATTGATGTT
GATGAAGTCA ATAAACTGCT GAGTATTGAT CTGAATGATC CGCTGGCGGT ACGTGACCGG
GCCATGCTGG AGGTGATGTA CGGCGCGGGG CTGCGTTTAT CTGAATTGGT TGGCATGAAC
TGTAAACATG TGGATCTGGC GAGCGGCGAT GTCTGGGTGA TGGGGAAGGG CAGTAAAGAG
CGCAAGGTGC CGTTAGGTAA AACGGCGGTG ACCTGGTTAC AGCATTGGCT GGCGTTACGT
GAGTTATTCG AACCGCAAGA TGACGCTATT TTTCTGGCCA ATACCGGCAA GCGTATTTCA
GCCCGTAATG TGCAGAAGCG CTTTGCCGAA TGGGGGGTGA AGCAGGGGGT CAGTAGCCAC
ATTCACCCAC ATAAATTACG TCACTCTTTT GCCACGCACA TGCTGGAATC CAGTGGTGAT
CTACGCGCAG TACAAGAGCT ACTGGGCCAT GCCAACCTGA CCACCACGCA AATTTATACA
CATCTCGACT TTCAACATCT GGCGACAGTG TATGATGCTG CTCATCCACG GGCCAAACGA
GGCAAATCCT GA
 
Protein sequence
MTEFSASLAP QVEAFLRYLS IERQLSPLTV TSYRRQLSAL MEIGEQMGLA HWQTLDAAQV 
RSLVSRSKRA GLHASSLALR LSALRSFLNW LVSQGVLPAN PAKGVSTPRS GRHLPKNIDV
DEVNKLLSID LNDPLAVRDR AMLEVMYGAG LRLSELVGMN CKHVDLASGD VWVMGKGSKE
RKVPLGKTAV TWLQHWLALR ELFEPQDDAI FLANTGKRIS ARNVQKRFAE WGVKQGVSSH
IHPHKLRHSF ATHMLESSGD LRAVQELLGH ANLTTTQIYT HLDFQHLATV YDAAHPRAKR
GKS