| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A0501 |
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| Symbol | |
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| ID | 5798964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | - |
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| Start bp | 521297 |
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| End bp | 523924 |
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| Gene Length | 2628 bp |
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| Protein Length | 875 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641338506 |
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| Product | fimbrial usher protein |
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| Protein accession | YP_001605098 |
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| Protein GI | 162419981 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.316711 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00141222 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGTGCAGG CACGGGTCAT TCTGAAAAAA AATTTCTCAG GCCGTAGGAA AGCATTAACA
TTATGTATAA CTTTAATTTT ACATATTGAT ACTGCTTTTG GGCAGGAAGA ACCACAAAAT
TTCGAATTTG ATGAATCTCT TTTTTTAGGG ACAAAATATG CATCAGGTTT GACCCAGCTT
AATAAAAAAA ATTCTATAAC TGCCGGGAAT TATGATGCTG TAGATGTTTT GGTTAATAAC
AAATTGTTCA AACGTATGAG CGTGCAATTT ATTAAAGATG CCAACTCATC TGAGGTTTAT
CCCTGTCTGA GCGACGAGTT ATTAACCGCG GCTGGCGTTG AACTGGGTAG AGAAAATAGC
ACCCCTCCCA AAGAACCCCA TGTTACCGAG GCTAATACTC CCATAACTGA AACTCACGCC
CCAACGAACC AATGTTTACC TCTGTCTACG CGGGTAAAAG GGGCATCCTT TCGATTTGAT
CAGGCTAAAT TACGTTTAGA GCTTTCGATT CCACAGGCTC TATTACAAAA ACGGCCCAGG
GGCTACATTG AGCGGGCGGA ATGGCAGGAA GGCGAAAAAC TCGCATTCAT TAACTACAGC
GCCAACGCTT ATCGCAGTGA TACTCGCGGC CAGCAAAAGA GAACCTCTGA TTTTGGTTTT
ATTGGCCTTA AAAGTGGGAT CAATCTGGGA TTGTGGCAAG TACGCCAGCA ATCGAACGTC
CGCTACGCCA GTAATGATAG TGGCAGCGAT ACCCAGTGGA ATAGCATCCG CACTTATGTG
CAACGCCCGA TCCCACAGTT GGATAGCCAG TTAACGTTAG GCGAAACTTT CACTGACAGT
ACATTATTTG GCAGCATGTC GTTCCTCGGT GCGAAAATGG CTACCGACCA ACGCATGTGG
CCAGTGTCAA TGCGCGGTTT CTCCCCAGAG GTCCGGGGTG TCGCCAGTAC CAACGCACGC
GTTATTATTC GTCAGAATGG ACGTGAAATT TATGAGACGA ACGTCGCTCC TGGCCCGTTC
GTTATTAACG ATTTGTTCAG CACCAGTAGC CAAGGCGACC TTAATGTTGA GGTTATTGAG
GCCAATGGTA GCCGCTCGAC ATTTACGGTG CCATTCAGTG CCGTTCCTGA TTCAATGCGC
CCAGGCGTTA GCCGCTATAA TGCGGTGATC GGGGAATCAC GCGATTTCAC CAATATTGAT
AATTATTTCA CTGACTTCAC CTATGAACGC GGCCTCACCA ATCAACTGAC GGCCAACAGT
GGTGTCCGTT TAGCAAAAGA CTACACGGCA TTACTTGCCG GTGGCGTATT AGGGACACCG
GTCGGTGCTT TGGGCCTCAA TGCCACCTAT TCTCACGCCA AAGTTGAAAA TGATAAAACG
CAAGATGGTT GGCGGATGCA GGCCACCTAT AGCCAGACCT TTAATCAAAC CGGAACCACG
TTCTCTTTAG CCGGGTATCG TTACTCAACG AAAGGGTATC GCGATTTAAA TGATGTGTTC
GGGGTGCGTT CGATGCAAAA AAACGGGGGA ACGTGGGATT CATCAACCTA TAAACAGCGT
AGCCAATTCA CCACTACTAT TAATCAAGAC CTCGGTAATT GGGGCCAGTT ATACGCCTCT
GCCTCAACCA GTGATTATTA TAACGATACG GCGAGAGATA CCCAGTTACA GCTAGGCTAT
TCAAATAGTT ATCAGCAAAT CAGTTACAAT TTGGCTGTCA GCCGCCAGCG CAGTGTTTAT
ACCTCCACTC TGTATAACTG GGATAGCCCT GATACCGACG AGACGGCAAC CACCACGCGC
TACGGTAATA CCGAGAACAT CGCAACATTC ACCGTTTCTA TTCCACTGAA TATTGGTAGC
AACAACCAAT ATCTATCAAT GTCAGCCAGC CGTAATCCGA AAAGCGGTAA TAACTATCAA
ACATCATTAT CAGGCACCGC CGGTGAGCGA AATTCCTTCA ACTATGCATT AAATGCAGGC
TATGACGACA GCAACTTCGG TAGTAGCTCA AATAATTGGG GGGCCAACGT ACAGAAGCAA
TTCCCCAATG CTACCGTTAA TGGCAGCTAT TCTCGTGGCA ATAATTACAC CCAATATGGC
GCAGGCGCTC GTGGTGCGGC GGTAATACAT CGACAAGGCG TGACTCTGGG CCCTTATCTG
GGTGAGACCT TTGGTTTAAT TGAAGCTAAT GGTGCTCAAG GGGCAAGAAT TGATAGTAAC
GGTTTTGCTC TGGTGCCCGC GCTAACGCCT TATAACTACA ACACAATAGG GCTGGATACC
AAGGGGATTA ACCGTAACAC CGAGTTGAAA GAGAATCAGG GCCGTGTCGT CCCTTATGCC
GGGGCAGCGG TAAAAGTGAA ATTTGAAACA CTGACTGGCT ATGCGGTGTT AATTCAAGCC
GAAGGTGAGG GGTTACCACT GGGTGCCGAT GTGTATAACA GCAAAGATGA ACTGGTTGGA
ATGGTAGGTC AGGGGAATCA GATCTACGCA CGGATAGCCG ATAACAAAGG TACACTTGAT
GTCCGTTGGG GCGAAAGCAG CGGTGATCAG TGTCAATTAC CTTATGCTTT TAATCGCCAG
GATACCGAGC AAGATATCAT TCATATAACC GCGAGTTGCC GCCGCTAA
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| Protein sequence | MVQARVILKK NFSGRRKALT LCITLILHID TAFGQEEPQN FEFDESLFLG TKYASGLTQL
NKKNSITAGN YDAVDVLVNN KLFKRMSVQF IKDANSSEVY PCLSDELLTA AGVELGRENS
TPPKEPHVTE ANTPITETHA PTNQCLPLST RVKGASFRFD QAKLRLELSI PQALLQKRPR
GYIERAEWQE GEKLAFINYS ANAYRSDTRG QQKRTSDFGF IGLKSGINLG LWQVRQQSNV
RYASNDSGSD TQWNSIRTYV QRPIPQLDSQ LTLGETFTDS TLFGSMSFLG AKMATDQRMW
PVSMRGFSPE VRGVASTNAR VIIRQNGREI YETNVAPGPF VINDLFSTSS QGDLNVEVIE
ANGSRSTFTV PFSAVPDSMR PGVSRYNAVI GESRDFTNID NYFTDFTYER GLTNQLTANS
GVRLAKDYTA LLAGGVLGTP VGALGLNATY SHAKVENDKT QDGWRMQATY SQTFNQTGTT
FSLAGYRYST KGYRDLNDVF GVRSMQKNGG TWDSSTYKQR SQFTTTINQD LGNWGQLYAS
ASTSDYYNDT ARDTQLQLGY SNSYQQISYN LAVSRQRSVY TSTLYNWDSP DTDETATTTR
YGNTENIATF TVSIPLNIGS NNQYLSMSAS RNPKSGNNYQ TSLSGTAGER NSFNYALNAG
YDDSNFGSSS NNWGANVQKQ FPNATVNGSY SRGNNYTQYG AGARGAAVIH RQGVTLGPYL
GETFGLIEAN GAQGARIDSN GFALVPALTP YNYNTIGLDT KGINRNTELK ENQGRVVPYA
GAAVKVKFET LTGYAVLIQA EGEGLPLGAD VYNSKDELVG MVGQGNQIYA RIADNKGTLD
VRWGESSGDQ CQLPYAFNRQ DTEQDIIHIT ASCRR
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