Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A0425 |
Symbol | |
ID | 5798888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 442064 |
End bp | 446389 |
Gene Length | 4326 bp |
Protein Length | 1441 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641338431 |
Product | pertactin family protein |
Protein accession | YP_001605030 |
Protein GI | 162420670 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3468] Type V secretory pathway, adhesin AidA |
TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0113574 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAACA GTAATACTCT TAATACGCGT CTGCTACCAC TGTCTATTTT AATTTCATCG TTGGTTTCTG GCGGGGCTAT GGCTGTGTCA CAAATAGCAA CCACTGATAC ACCCGCAGTA ACACCAATAA AATCAACACT AACAGGTCCA TTTGAGCGGA ATTCGGCTGG TACAAGTTTT GGATCAAATG TAGATGTAAT TGATAATACA TCTACGGCAA CCCGCGTGAT TGCTGAAACT ACGCCGGAAG CCGAGAGCAC AATTGGTGAA GCGACTGGGC AAGAAGGCGG TAACGCAACA GCCGTTATCC CCCCTACTAC AACACCATCA GAGCAGGAAA TCACAGAACC TGAACAACCG GGCCTGCTTG ATAAGATCAA AGATCTGCTG GGGTTGGGTG AAATTACTCA AGAACAAGCC GATGCATTAG AAAAAAACGT TAAGACTAAA GTTGAGAAAG TGGACGCACA GACTGCGGCG AAGTTGGCAC TTGAATCAGC CCAAGCAGAG GCCCAAAAAG CAGCAGAAGA TGCTTTATAT CTAAAAACCG AAAATGTTTC ATATCAGGCA TTCGCTCAAA CTGAAGAAAA GATTAAAAAA GAAGCTGATG AAGCAAAAAA AAAGCAAGAT AAGACTAAAG AAGATGCCAT TAAGGCCGTC AAGGTTAATA ACACTCCATT AGTTCCTGGT GATAAGGATA TTGCTGAGAA AGTCACCAAA GCCGTGACCG ATACAACAAA AGTACAGGGA GAAAAAGCAG TTACTCTGGC TACAAAAATA ACTGATGCCA AAGTCGCCCA AGAAAAGAAA GACGCGAATA CAGAGGCGCT TGCAGAAATC GACGGGCGGC TCATTTCTGT CTCAAACGCT TTAATACAAG CGACAGGTAC CGATAAGGGT CCGTTGGATC AGAAACTTAA AGAAGCTCAA CAAGCTAAAA CCGAACAAGA CGGAAAAGAA CTGGCGTCCG GCGGGTATAA AGAACTCTTC GAGGAGGATA AGAAAACTAG CGGTTACTTT GGCATTGCGG AAAATGACAA CGGCTCGGGA CAGCAAGAAA AATTAGCCGA AGCAAAAAAG AATCGAGATG CCTATAACAA AGCAGCTAAA AAAGAACTTG ACGCTATCGC CAAGGCCCAA AAAGCAGTTG AGGCTATTGA TGCACAGATA GTAAAATTAA AAAAAGATAA AGGTGATATC GAACAAGAAC AAAGTACCGA AAAGGGCAAA ACAGGTGGTT TAGATATTGC GCTCAGCGGT GCTAACGACG CTAAAGACGC AGCACAGGGT GAATTCGACA CGGCAAAAAA CGCAGCTGAA TTAGCTGAAT TAGCTGAAAC AGCAGCAAAG GCTATCGAAG CAGCAAAAAT CACCGATAAG GCAGTTGAGG ATGCAACAGC AGCTTATAAA GAAGCCGCAG ACAAAGCGGA ACAAACTAAA ACAGCCCTTG AAGCGGCTGA AAAAGCTAAA GAAGACGCTG ATAAACTCGT AGTCACTAAC ACTGGCCTAT TGAATGACGC TGACCAAGCA CTTGAGCAGT TAGTGACCGC CCAAAATAAC GCCCAACCTA CACTTGATCT GCCAGCCATT GATGTGACCA TTGCGCCTGC CAAGACACAA GATGTGATTG AGGGCACCAG CGCCATTGCC ACCCAAGTGG CCGGTGGCAC ACAAAATGTT GCCAAGGGCG GTAAAGCGAT TGATAGCGTT ATTACCAAAG ACGGTATTGT AAACCTTGCT GCTGGTGCCA ATGCCAAAGG GACCGAGGTT ACTAAAGGTA CCCTGAACAA CAACGGCGGG GTTGATACCG ATACTGTTGT CAGTACTGAA GGTAAATTGG TTCTGACGGG TGGTAGCGAA ACGGCCATCG CAACCTCAAC CGGTGCCAAG GTTGCTGAAG GTGGTGTAGT GACCGCAGGT GACCATTCCG TTATCGAAAA AATGATCAGT AGCGGTAACG TGACCGCCAG CGGCAATAAT ACCATCGTGC GTGATACGAC CATTAATGAC GGTAAATTAA GCCTGGCAGG CACCGCAACC GCCAATAACA CCACGTTCAA CGGCGGTATT TTCAGCGTTG AAGGTGATAC CGCTGCCACC AAGACTAACA TGACTGGCGG TAAATTTGCT GTTACAGGCA ATGCCACAAT TAAAGACACC GTGCTCAGCG CCAGTGACTT CTCGCTGGCT GACAAAGTCA CCGCAAACAA CACCACCCTG ACTGGCGGTA CCTTTACCGT TGCAGGTGAT ACCGCTGCCA CCAAGACTAA GATGACTGGT GGTGAATTTG CTGTTACAGG CAATGCCAAG ATTGAAGACA CCGTACTCAA CGCAAGTGAC TTCTCGCTGG CTGACAAAGC CACCGCGAAC AACACCACCC TGACTGACGG TACTTTCACC GTTGCAGGTG ATGCCGCGGT CACCGCGACG AACATGAGTG GCGGTAAATT TGCGGTTAAA GGCAAAGCCA AGATCAAAGA CACCCAACTC AGTGCAGGTA ATTTCACTCT GGCTGAAAAT GCCACAGCGA ATGACACCAC ACTGAATGGC GGTAAATTTG ACGTTTCGAA CGAGGCTACA GCGACTAACA CCACCATTAA TAACGGCCTG TTTACGCTGA AAGATGGCGC TCACGCGGAC AGCACCACAG TCAATAGCGG CACCTTCGTC ATGGCCGATC AATCTACGGC CAACGGCATC CAACTGGTAG ACAGCGCCTT CACACTCGCA AGCGGTGCTA AAGCCTCCGG TATCACCAAA TTAACTGGCG GTCAGGCACA GGTAGCCGGT TCACTGGAAA GCTTGAGCCT TACCGGTGGC CGCGCAGACT TTGCCAACAG CGCCAAAGCC TCTGGCCTGC TTGATATCAG CGCTGATAGC CAGATCATAA TGAACCGCGG TGCAGATACC GCACAAGCGA ACCTGAACCT GGCTGGCCGC CTTGAATTGC TCGCCAGTGA TGTTGCTCAA GCAGTGGCTC AGCCAGTTGC CCGTGCGGCC ATGGAGTTAT CAAATGCGCG TGCGGTAATG CCAGCCCCTG CAATGCCAGT CCCTGCCGCC GCACCGGTTG CACACTTCGC CCTCAACGAT GTGGTTATGA CCGGGGGCAC TGTCGATATG AGCAACGCGA AAAATGCTCA ACTGACCATG GCTTCACTGA ATGGTACAGG GAACTTTAAC CTCGGTTCTG TCATGCAAAG CGATTCGGTC GCGCCATTAA ATGTATCCGG TGACGCGAAC GGTGACTTCA TCATTGCAAT GAATAGCAGC GGTCAAGCAC CAACTAACCT GAATGTGGTA AATACCAACG GTGGTGATGC ACGCTTTGCC TTAGCCAATG GTCCGGTTGC TTTAGGTAAC TACATGACTA ACCTGGCTAA AGATGCCAAC GGTAACTTTG TCCTGACCGC AGATAAATCG GCTATGACAC CAGGCACTGC CGGTATTCTG GCCGTGGCTA ACACCACACC GGTTATCTTT AACGCTGAGT TAAGTTCTAT TCAACAGCGT TTGGATAAGC AAAGCACCGA AACCAACCAA AGCGGCATGT GGGGCAGCTA CCTGAACAAC AACTTTGCAG TGAAAGGCCG CGCCGCTAAC TTCGATCAGA AGTTGAACGG GATGACATTG GGTGGCGATA AAGCCACTGC ACTGGCAGAC GGCGTGTTGA GCGTTGGTGG TTTCGCCAGC TACAGCAGCT CTGATATCAA AACGGATTAT CAAAGCAAAG GTAAAGTGGA TAGCCATTCA TTCGGTGCCT ACGCACAATA CCTGGCTAAC AGCGGTTACT ACATGAACGC GGTAGTGAAG AATAACCAGT TTAGCCAAGA CGTTAACATC ACCTCAATTA ACGGCAGCGC CAGCGGTGTG TCTAACTTCT CGGGTATGGG TATCGCACTG AAAGCCGGTA AGCACTTCAA CTTCAATGAG GCTTACGTCT CGCCATACGT TGCAATGAGC GCCTTTAGCT CGGGTAAGAG CAACATCTCC TTGTCTAACG GCATGGAAGC ACAGAGCAGC AGCACCCGCT CTGCGATGGG TACCCTTGGG GTGAATGCAG GTTACCGCTT CGTGATGAAC AACGGCGCAG AACTCAAGCC ATACGCTATC TTCGCGGTGG ATCATGAGTT CGCGAAAAAC AACCAAGTGA CGGTGAATCA GGAAGTGTTT GACAATAACT TGAGCGGGAC CCGTGTGAAC ACCGGCGCCG GCATGAACGT CAACATCACC CCTAATCTGT CTGTCGGTTC TGAAGTGAAG TTGTCCAGCG GTAAAGATAT CAAGACACCA GTAACCATTA ATCTGAACGT GGGTTACAGC TTCTAA
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Protein sequence | MKNSNTLNTR LLPLSILISS LVSGGAMAVS QIATTDTPAV TPIKSTLTGP FERNSAGTSF GSNVDVIDNT STATRVIAET TPEAESTIGE ATGQEGGNAT AVIPPTTTPS EQEITEPEQP GLLDKIKDLL GLGEITQEQA DALEKNVKTK VEKVDAQTAA KLALESAQAE AQKAAEDALY LKTENVSYQA FAQTEEKIKK EADEAKKKQD KTKEDAIKAV KVNNTPLVPG DKDIAEKVTK AVTDTTKVQG EKAVTLATKI TDAKVAQEKK DANTEALAEI DGRLISVSNA LIQATGTDKG PLDQKLKEAQ QAKTEQDGKE LASGGYKELF EEDKKTSGYF GIAENDNGSG QQEKLAEAKK NRDAYNKAAK KELDAIAKAQ KAVEAIDAQI VKLKKDKGDI EQEQSTEKGK TGGLDIALSG ANDAKDAAQG EFDTAKNAAE LAELAETAAK AIEAAKITDK AVEDATAAYK EAADKAEQTK TALEAAEKAK EDADKLVVTN TGLLNDADQA LEQLVTAQNN AQPTLDLPAI DVTIAPAKTQ DVIEGTSAIA TQVAGGTQNV AKGGKAIDSV ITKDGIVNLA AGANAKGTEV TKGTLNNNGG VDTDTVVSTE GKLVLTGGSE TAIATSTGAK VAEGGVVTAG DHSVIEKMIS SGNVTASGNN TIVRDTTIND GKLSLAGTAT ANNTTFNGGI FSVEGDTAAT KTNMTGGKFA VTGNATIKDT VLSASDFSLA DKVTANNTTL TGGTFTVAGD TAATKTKMTG GEFAVTGNAK IEDTVLNASD FSLADKATAN NTTLTDGTFT VAGDAAVTAT NMSGGKFAVK GKAKIKDTQL SAGNFTLAEN ATANDTTLNG GKFDVSNEAT ATNTTINNGL FTLKDGAHAD STTVNSGTFV MADQSTANGI QLVDSAFTLA SGAKASGITK LTGGQAQVAG SLESLSLTGG RADFANSAKA SGLLDISADS QIIMNRGADT AQANLNLAGR LELLASDVAQ AVAQPVARAA MELSNARAVM PAPAMPVPAA APVAHFALND VVMTGGTVDM SNAKNAQLTM ASLNGTGNFN LGSVMQSDSV APLNVSGDAN GDFIIAMNSS GQAPTNLNVV NTNGGDARFA LANGPVALGN YMTNLAKDAN GNFVLTADKS AMTPGTAGIL AVANTTPVIF NAELSSIQQR LDKQSTETNQ SGMWGSYLNN NFAVKGRAAN FDQKLNGMTL GGDKATALAD GVLSVGGFAS YSSSDIKTDY QSKGKVDSHS FGAYAQYLAN SGYYMNAVVK NNQFSQDVNI TSINGSASGV SNFSGMGIAL KAGKHFNFNE AYVSPYVAMS AFSSGKSNIS LSNGMEAQSS STRSAMGTLG VNAGYRFVMN NGAELKPYAI FAVDHEFAKN NQVTVNQEVF DNNLSGTRVN TGAGMNVNIT PNLSVGSEVK LSSGKDIKTP VTINLNVGYS F
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